KEGG   Homo sapiens (human): 26871
Entry
26871             ncRNA     T01001                                 
Symbol
RNU1-1, HSD1, HU1-1, RNU1, RNU1A, RNU1A3, RNU1G4, Rnu1a1, U1, U1A1
Name
(RefSeq) RNA, U1 small nuclear 1
  KO
K14276  U1 spliceosomal RNA
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01970  Spliceosome assembly (B complex formation)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    26871 (RNU1-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    26871 (RNU1-1)
  09184 RNA family
   03100 Non-coding RNAs [BR:hsa03100]
    26871 (RNU1-1)
Spliceosome [BR:hsa03041]
 Splicing related RNAs
  26871 (RNU1-1)
Non-coding RNAs [BR:hsa03100]
 Small nuclear RNA
  Sm-class snRNA
   26871 (RNU1-1)
SSDB
Other DBs
NCBI-GeneID: 26871
HGNC: 10120
Ensembl: ENSG00000206652
LinkDB
Position
1:complement(16514122..16514285)
NT seq 164 nt   +upstreamnt  +downstreamnt
atacttacctggcaggggagataccatgatcacgaaggtggttttcccagggcgaggctt
atccattgcactccggatgtgctgacccctgcgatttccccaaatgtgggaaactcgact
gcataatttgtggtagtgggggactgcgttcgcgctttcccctg

KEGG   Homo sapiens (human): 6625
Entry
6625              CDS       T01001                                 
Symbol
SNRNP70, RNPU1Z, RPU1, SNRP70, Snp1, U1-70K, U170K, U1AP, U1RNP
Name
(RefSeq) small nuclear ribonucleoprotein U1 subunit 70
  KO
K11093  U1 small nuclear ribonucleoprotein 70kDa
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01970  Spliceosome assembly (B complex formation)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6625 (SNRNP70)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    6625 (SNRNP70)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    6625 (SNRNP70)
 Complex B
    6625 (SNRNP70)
SSDB
Motif
Pfam: U1snRNP70_N RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 6625
NCBI-ProteinID: NP_003080
OMIM: 180740
HGNC: 11150
Ensembl: ENSG00000104852
UniProt: P08621
Structure
LinkDB
Position
19:49085451..49108604
AA seq 437 aa
MTQFLPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRDAPPPTRA
ETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLR
REFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRDDTSRYDERPGPSPLPHRDRDRDRERE
RRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERAR
RERERKEELRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRS
ERERRRDRDRDRDRDREHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSRDMYMESEGG
DGYLAPENGYLMEAAPE
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacccagttcctgccgcccaaccttctggccctctttgccccccgtgaccctattcca
tacctgccacccctggagaaactgccacatgaaaaacaccacaatcaaccttattgtggc
attgcgccgtacattcgagagtttgaggaccctcgagatgcccctcctccaactcgtgct
gaaacccgagaggagcgcatggagaggaaaagacgggaaaagattgagcggcgacagcaa
gaagtggagacagagcttaaaatgtgggaccctcacaatgatcccaatgctcagggggat
gccttcaagactctcttcgtggcgagagtgaattatgacacaacagaatccaagctccgg
agagagtttgaggtgtacggacctatcaaaagaatacacatggtctacagtaagcggtca
ggaaagccccgtggctatgccttcatcgagtacgaacacgagcgagacatgcactccgct
tacaaacacgcagatggcaagaagattgatggcaggagggtccttgtggacgtggagagg
ggccgaaccgtgaagggctggaggccccggcggctaggaggaggcctcggtggtaccaga
agaggaggggctgatgtgaacatccggcattcaggccgcgatgacacctcccgctacgat
gagaggcccggcccctccccgcttccgcacagggaccgggaccgggaccgtgagcgggag
cgcagagagcggagccgggagcgagacaaggagcgagaacggcgacgctcccgctcccgg
gaccggcggaggcgctcacggagtcgcgacaaggaggagcggaggcgctccagggagcgg
agcaaggacaaggaccgggaccggaagcggcgaagcagccggagtcgggagcgggcccgg
cgggagcgggagcgcaaggaggagctgcgtggcggcggtggcgacatggcggagccctcc
gaggcgggtgacgcgccccctgatgatgggcctccaggggagctcgggcctgacggccct
gacggtccagaggaaaagggccgggatcgtgaccgggagcgacggcggagccaccggagc
gagcgcgagcggcgccgggaccgggatcgtgaccgtgaccgtgaccgcgagcacaaacgg
ggggagcggggcagtgagcggggcagggatgaggcccgaggtgggggcggtggccaggac
aacgggctggagggtctgggcaacgacagccgagacatgtacatggagtctgagggcggc
gacggctacctggctccggagaatgggtatttgatggaggctgcgccggagtga

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