KEGG   Homo sapiens (human): 57697
Entry
57697             CDS       T01001                                 
Symbol
FANCM, FAAP250, KIAA1596, POF15, SPGF28
Name
(RefSeq) FA complementation group M
  KO
K10896  fanconi anemia group M protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
  Element
N01464  Fanconi anemia pathway
Disease
H00238  Fanconi anemia
H00627  Premature ovarian failure
H01282  Spermatogenic failure
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    57697 (FANCM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    57697 (FANCM)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     57697 (FANCM)
SSDB
Motif
Pfam: FANCM-MHF_bd DEAD Helicase_C ResIII ERCC4 Cas3-like_C_2 HHH_2
Other DBs
NCBI-GeneID: 57697
NCBI-ProteinID: NP_065988
OMIM: 609644
HGNC: 23168
Ensembl: ENSG00000187790
UniProt: Q8IYD8
Structure
LinkDB
Position
14:45135930..45200890
AA seq 2048 aa
MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA
AYEAERQLCLENGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI
AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQASTRKEI
WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR
ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILTYSHERKVEKLIVPLGEELAAI
QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE
FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF
ARTRSTSANGISAIQQGDKNKKFVYSHPKLKKLEEVVIEHFKSWNAENTTEKKRDETRVM
IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL
VSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVIILSEGREERIYNQ
SQSNKRSIYKAISSNRQVLHFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS
SIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKP
AQESTTGIHQLSLSEWRLWQDHPLPTHQVDHSDRCRHFIGLMQMIEGMRHEEGECSYELE
VESYLQMEDVTSTFIAPRNESNNLASDTFITHKKSSFIKNINQGSSSSVIESDEECAEIV
KQTHIKPTKIVSLKKKVSKEIKKDQLKKENNHGIIDSVDNDRNSTVENIFQEDLPNDKRT
SDTDEIAATCTINENVIKEPCVLLTECQFTNKSTSSLAGNVLDSGYNSFNDEKSVSSNLF
LPFEEELYIVRTDDQFYNCHSLTKEVLANVERFLSYSPPPLSGLSDLEYEIAKGTALENL
LFLPCAEHLRSDKCTCLLSHSAVNSQQNLELNSLKCINYPSEKSCLYDIPNDNISDEPSL
CDCDVHKHNQNENLVPNNRVQIHRSPAQNLVGENNHDVDNSDLPVLSTDQDESLLLFEDV
NTEFDDVSLSPLNSKSESLPVSDKTAISETPLVSQFLISDELLLDNNSELQDQITRDANS
FKSRDQRGVQEEKVKNHEDIFDCSRDLFSVTFDLGFCSPDSDDEILEHTSDSNRPLDDLY
GRYLEIKEISDANYVSNQALIPRDHSKNFTSGTVIIPSNEDMQNPNYVHLPLSAAKNEEL
LSPGYSQFSLPVQKKVMSTPLSKSNTLNSFSKIRKEILKTPDSSKEKVNLQRFKEALNST
FDYSEFSLEKSKSSGPMYLHKSCHSVEDGQLLTSNESEDDEIFRRKVKRAKGNVLNSPED
QKNSEVDSPLHAVKKRRFPINRSELSSSDESENFPKPCSQLEDFKVCNGNARRGIKVPKR
QSHLKHVARKFLDDEAELSEEDAEYVSSDENDESENEQDSSLLDFLNDETQLSQAINDSE
MRAIYMKSLRSPMMNNKYKMIHKTHKNINIFSQIPEQDETYLEDSFCVDEEESCKGQSSE
EEVCVDFNLITDDCFANSKKYKTRRAVMLKEMMEQNCAHSKKKLSRIILPDDSSEEENNV
NDKRESNIAVNPSTVKKNKQQDHCLNSVPSGSSAQSKVRSTPRVNPLAKQSKQTSLNLKD
TISEVSDFKPQNHNEVQSTTPPFTTVDSQKDCRKFPVPQKDGSALEDSSTSGASCSKSRP
HLAGTHTSLRLPQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCDYIVSNR
MVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFRRTKSYDS
LLTTLIGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSNKSEALQFYLSIP
NISYITALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVFDIQMLPNDLN
QDRLKSDI
NT seq 6147 nt   +upstreamnt  +downstreamnt
atgagcggacggcaaagaacgctttttcagacgtggggctcaagtatctcccgatcatct
gggactccgggttgcagctccggaactgagcgacctcagagccctggcagctccaaggcg
cctttgccagcagcagcggaggctcagctggagtcggacgatgatgtgttgcttgtcgcg
gcgtacgaggctgagcggcagttgtgtctagagaatggcgggttctgcacctccgcgggc
gccctgtggatttaccctaccaattgcccagtgcgggactaccagctgcacatttcccgg
gctgctctgttttgcaatacgctggtgtgtctgcctaccggactgggaaagacctttatt
gccgccgtggtcatgtacaatttctaccgctggttcccttcaggaaaggtggtcttcatg
gccccaacgaaacccttggtgacacagcagatcgaggcttgctaccaggtgatgggtatc
ccgcaatcccacatggccgaaatgacagggtctacacaagcttccaccaggaaggaaata
tggtgcagtaagagagtgctttttcttacacctcaggtcatggtaaatgacctttctaga
ggagcttgtcccgctgctgaaataaagtgtttagttattgatgaagctcataaagctctc
ggaaactatgcttattgccaggttgtaagagaactagtcaaatatacaaatcactttaga
atcttggctctaagtgccacaccaggtagtgatataaaggctgtgcaacaagttattact
aacctgctaattgggcagatagagcttcgttctgaagattctccagatattttgacatat
tctcatgaaagaaaagttgaaaagcttattgttccgcttggtgaagaacttgcagccatc
caaaagacctatatccagattttggaatcatttgctcgttctttgattcagaggaatgtt
ttgatgagaagggatatcccaaatctaacaaaatatcagataattctggcaagagatcag
tttaggaaaaacccatctccgaatattgtgggaatacaacaaggcataatcgagggagag
tttgctatttgtattagtttatatcatggttatgaattattgcagcaaatgggaatgaga
tcattatatttcttcctttgtggaattatggatggaactaaagggatgacacggtcaaaa
aatgaacttggccgaaatgaagacttcatgaaactctataatcatctagagtgtatgttt
gcacgtacacgtagtacttcagcaaatggtatttctgctatccaacaaggagataaaaat
aaaaaatttgtttatagtcatccaaagttaaagaaattagaagaagttgtaattgaacac
ttcaagtcatggaatgctgaaaacactactgaaaagaaacgtgatgagacccgagttatg
atcttctcttcatttcgagatagtgttcaagaaattgcagaaatgctttcacagcatcag
ccaattattagagtaatgacttttgtcggccatgcctcagggaaaagcacgaagggtttt
acccagaaggagcaactggaggtagtgaaacagtttcgtgacggtggttacaacacgctg
gtttctacctgtgtgggtgaagaaggtttggatataggagaagttgatcttataatatgt
tttgattcccagaagagcccaattcgtcttgtacaacgaatgggtagaactggccgtaaa
cgtcaaggcaggatagttattatcctttctgaaggacgagaggaacgtatttataatcag
agtcagtccaacaaaagaagtatatataaagctatttcaagtaacaggcaggtccttcat
ttttaccaaagaagtccacgaatggttcctgatggaatcaacccaaaattacacaaaatg
ttcatcacacatggtgtctatgaaccagagaagccttctcggaacttgcagcgaaagtca
tctatcttttcctatagggatggaatgaggcaaagtagcctaaagaaagattggttctta
tcagaagaagaatttaaattatggaacagactttatagattaagggacagtgatgaaatt
aaagagataacattgcctcaagttcagttttcttctttacaaaatgaggaaaacaaacca
gctcaagaatcaaccactggaattcatcaactctctctctctgaatggagactgtggcaa
gatcatcctttgcctacacatcaagttgatcactcagatcgatgccgccattttataggc
cttatgcaaatgatagagggaatgagacacgaagagggagaatgcagctatgaattggaa
gttgaatcttatttacaaatggaagatgttacctcaacatttattgctcccaggaatgaa
tctaataatcttgccagtgacacctttatcactcacaagaaatcgtcatttataaagaac
ataaatcaaggcagttcatcctcagtgatagaatctgatgaagaatgtgctgaaattgtt
aaacaaactcatatcaaacctactaaaattgtttctttaaagaaaaaagtgtctaaagaa
ataaaaaaagatcagcttaaaaaagaaaataatcacggtattatagattctgtagataat
gacagaaattccactgttgaaaatatttttcaagaagacctaccaaatgataaaaggaca
tcagatacagatgaaattgctgccacatgtactattaatgaaaatgttattaaagaaccg
tgtgtgttattaacagagtgtcagtttacaaataaatccactagttcacttgctggaaat
gttttagattctggttataacagtttcaatgatgaaaaatctgtttcatctaacttattt
cttccattcgaagaagagctttatattgttagaacagatgaccaattttataattgtcac
tcattgacaaaagaggtactagctaatgtagagagatttttatcttattctcctccgcct
ctcagtggactctcagacttggaatatgaaattgctaagggtactgcacttgagaatttg
cttttcttaccctgtgcagagcatttacgaagtgataaatgcacctgtttgctgtcacat
tcagctgtgaattctcaacagaatttagaattgaattcacttaaatgtataaattatcca
tctgaaaaaagttgcctttatgatatacctaatgataatatttctgatgagccaagtctc
tgtgactgtgatgtacataaacataatcaaaatgaaaatttagtacctaacaatcgtgtt
caaatacacagaagccctgcacagaatttagttggagagaacaatcatgatgttgataac
agtgacctcccagtattgtccactgatcaagatgaaagtttgctgttatttgaagatgtt
aatacagagttcgacgatgtgagtctttcacccttgaacagtaaaagcgaatctttacct
gtgtcagacaaaactgctattagtgaaacgcctctggtctctcagttcttaatttctgat
gaacttttgttggacaataattctgaactccaagatcaaatcacccgtgatgctaatagt
tttaaatctcgtgatcagagaggtgtacaggaagaaaaagtgaagaatcatgaggatatt
tttgattgctctagggatttattttctgttacctttgatttaggattctgtagtccagat
tctgatgatgaaatattggaacatacatcagatagcaatagacctctagatgatctatat
ggaaggtatttggaaattaaggagataagtgatgcaaattatgtttcgaatcaagcacta
ataccaagagatcatagtaaaaattttactagtggaactgttattatcccatcaaatgaa
gatatgcagaatccaaattatgtacatttgccactgagtgcagcaaaaaatgaagaattg
ttatctcctggttattctcagttttctttaccagtgcaaaaaaaagttatgagtacacca
ctctctaaatcaaacacattgaactcattttctaagataagaaaggaaatacttaagaca
ccagattctagtaaggaaaaagtaaacctacaaagattcaaagaagcattgaattcaact
tttgattattcagaattttctctagaaaagtctaaaagcagtggtccaatgtatctgcat
aaatcctgtcattctgttgaagatggacaattattaacaagtaacgaaagtgaagatgac
gagattttccgaagaaaagttaaaagagcaaaaggaaatgttttaaactctcctgaggat
cagaaaaatagtgaagttgattctccacttcatgctgtcaaaaagcgcagatttcctata
aacagatcagaattatcatctagtgatgagagtgagaattttcccaaaccatgttcacaa
ttagaagacttcaaggtttgtaacgggaatgccagaagaggcatcaaagtcccaaagaga
cagagtcacttaaagcatgtagctaggaagtttttagatgatgaagcagaactttctgaa
gaagatgcagaatatgtttcatcagatgaaaatgatgagtcagaaaatgaacaagattcc
tcattacttgactttttaaatgatgaaactcaactttcacaggctataaatgattctgaa
atgagagctatttacatgaaatctttgcgtagtccaatgatgaacaataagtacaaaatg
attcataagacacataaaaacataaacattttctcgcagattcctgaacaagatgaaacc
tatttagaggatagtttttgtgttgatgaagaggagtcttgcaaaggccaatcaagtgaa
gaagaagtttgtgttgattttaacttaataactgatgattgctttgcaaatagtaaaaag
tataaaactcgacgtgcagtaatgctaaaagaaatgatggaacaaaattgtgcacattca
aaaaagaaattatccagaattattttaccagatgattcaagtgaggaggagaacaatgta
aatgataaaagagaatctaatattgcggttaacccaagcactgttaagaagaacaaacaa
caggaccattgtttaaattcagtgccttctggatcttctgcgcagtccaaggtgcgttct
actccaagagttaatccattagcaaagcagagcaaacagacatcgctgaatttaaaggat
acaatttccgaagtctcagacttcaaacctcagaatcataatgaagtccagtctaccaca
ccacccttcactactgttgattcacagaaagactgtagaaaatttccagttccacagaag
gatggtagtgctttggaggattctagcacttcaggggcatcctgttccaagtcaagacca
catttagctgggacacatacttctcttagacttccgcaggaaggaaaaggaacctgtatt
cttgtaggtggtcatgaaatcacttctggattagaagtaatttcttccctaagagcaatt
catgggttgcaagtagaagtttgtcctcttaatggctgtgattacatcgtgagtaatcgc
atggtggtggaaaggaggtctcaatctgagatgttaaatagtgtcaataagaacaagttc
attgagcagatccagcacctgcagagtatgtttgaaagaatatgtgtgattgtggaaaag
gacagagaaaaaacaggagacacatcaaggatgtttaggagaacaaagagctatgacagc
ctgctgactaccttaattggcgctggaatccgaattcttttcagttcctgccaagaagaa
accgcagatttgctaaaggaactgtctttagtggaacaaagaaagaatgttggtattcat
gttccaacagtggtgaatagtaataaaagtgaggcactccagttttatttaagtattccc
aatataagttatataactgcattaaatatgtgtcaccagttttcatctgtgaaaaggatg
gctaacagctcacttcaagaaatctccatgtatgcacaagtaactcatcagaaggctgag
gagatctatagatatattcactatgtatttgacatacaaatgttaccaaatgatcttaac
caagatagactgaaatctgatatataa

KEGG   Homo sapiens (human): 11073
Entry
11073             CDS       T01001                                 
Symbol
TOPBP1, Dpb11, TOP2BP1
Name
(RefSeq) DNA topoisomerase II binding protein 1
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03440  Homologous recombination
Network
nt06506  Double-strand break repair
nt06508  Interstrand crosslink repair
nt06509  DNA replication
  Element
N01451  ATR signaling
N01464  Fanconi anemia pathway
N01470  Pre-IC formation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    11073 (TOPBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsa03032]
    11073 (TOPBP1)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    11073 (TOPBP1)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    11073 (TOPBP1)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     11073 (TOPBP1)
SSDB
Motif
Pfam: BRCT PTCB-BRCT TopBP1_BRCT0 BRCT_2 RTT107_BRCT_5 LIG3_BRCT BRCT_TopB1_SLF1 ECT2_BRCT0
Other DBs
NCBI-GeneID: 11073
NCBI-ProteinID: NP_008958
OMIM: 607760
HGNC: 17008
Ensembl: ENSG00000163781
UniProt: Q92547 A0AV47 A7E2X7 Q05BV8
Structure
LinkDB
Position
3:complement(133600238..133661941)
AA seq 1522 aa
MSRNDKEPFFVKFLKSSDNSKCFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGVVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLEKEK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKITRYTDINMEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSIEKGFCQDESIYKTEPRPEAKTMPNSSTPT
SQINTIDSRTLSDVSNISNINASCVSESICNSLNSKLEPTLENLENLDVSAFQAPEDLLD
GCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPH
VVGAKWLLECFSKGYMLSEEPYIHANYQPVEIPVSHKPESKAALLKKKNSSFSKKDFAPS
EKHEQADEDLLSQYENGSSTVVEAKTSEARPFNDSTHAEPLNDSTHISLQEENQSSVSHC
VPDVSTITEEGLFSQKSFLVLGFSNENESNIANIIKENAGKIMSLLSRTVADYAVVPLLG
CEVEATVGEVVTNTWLVTCIDYQTLFDPKSNPLFTPVPVMTGMTPLEDCVISFSQCAGAE
KESLTFLANLLGASVQEYFVRKSNAKKGMFASTHLILKERGGSKYEAAKKWNLPAVTIAW
LLETARTGKRADESHFLIENSTKEERSLETEITNGINLNSDTAEHPGTRLQTHRKTVVTP
LDMNRFQSKAFRAVVSQHARQVAASPAVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVK
DALAALETPGRPSQQKRKPSTPLSEVIVKNLQLALANSSRNAVALSASPQLKEAQSEKEE
APKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKS
VKERGVHIVSEHWLLDCAQECKHLPESLYPHTYNPKMSLDISAVQDGRLCNSRLLSAVSS
TKDDEPDPLILEENDVDNMATNNKESAPSNGSGKNDSKGVLTQTLEMRENFQKQLQEIMS
ATSIVKPQGQRTSLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQN
EQIIWDDPTAREERARLASNLQWPSCPTQYSELQVDIQNLEDSPFQKPLHDSEIAKQAVC
DPGNIRVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEET
HEELKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLA
SVAAGKWVLHRSYLEACRTAGHFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKK
IQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSD
LNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLMQESPPHVENYCLPEAISFIQNNKELG
TGLSQKRKAPTEKNKIKRPRVH
NT seq 4569 nt   +upstreamnt  +downstreamnt
atgtccagaaatgacaaagaaccgttttttgtgaagtttttaaagtcttcagacaattcc
aaatgtttttttaaagctctcgagtccataaaagaattccaatcagaagaatatcttcag
attattacagaagaagaggcattgaagataaaggagaatgatagatcactttatatctgt
gacccttttagtggcgttgtctttgatcacctcaaaaagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccagcgatgtgtcccaagagccgaacatcca
gtttataatatggttatgtctgatgtaaccatatcttgtacaagtctggaaaaagaaaaa
agggaagaagttcataaatatgtacaaatgatgggcggacgagtatacagagaccttaat
gtatcagtaactcaccttattgcaggagaagttggtagcaaaaaatatttagttgctgca
aacctgaagaaacctattttgcttccctcttggataaaaacactttgggagaagtcacaa
gagaaaaaaataactagatatactgatataaacatggaagatttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttatgtggcttagacaggaaagaagttcagcaa
ctcacagttaagcatggaggtcaatacatgggacaattgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccaaaaggtcagaagtatgagtgtgccaagagatggaatgtacac
tgtgtgaccacacagtggttttttgacagtattgagaaaggtttttgtcaggatgaatcc
atatacaagacagaacctagaccagaagcaaagactatgcccaattcttcaactcctacc
agccagatcaacacaattgatagtcgtactctttcagatgtcagcaatatttccaacata
aatgcaagttgcgtaagtgaatcaatatgtaattcacttaacagcaaactggagcctaca
cttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttattagat
ggttgtcggatatatctttgcggttttagtggcagaaagctagataaactgagaagactt
attaacagtggaggtggagttcgttttaaccagctaaatgaagatgtaactcatgttatt
gtgggagattatgatgatgaattgaagcagttttggaataaatcagcccacaggcctcat
gtagtgggagcaaagtggttgctagagtgtttcagtaaaggttatatgctttctgaagaa
ccatatatccatgctaattaccagccagtggaaattccagtttcacataagcctgaaagt
aaagcagctcttttaaaaaagaagaacagcagcttctctaagaaagactttgctcctagt
gaaaagcatgagcaagctgatgaagatctgctctctcaatatgaaaatggtagctccaca
gtagttgaggctaagacgtctgaagccaggccctttaatgattctactcatgctgagccc
ttgaatgattctactcacatttctttgcaagaagaaaaccagtcttctgtcagtcattgt
gtccctgatgtttctacaattactgaagaaggcttatttagccaaaagagtttccttgtt
ttgggttttagtaatgaaaatgaatctaacatcgcaaacatcataaaagaaaatgctggg
aaaatcatgtcccttctgagcagaactgttgcggattatgctgtggttcctctgctgggg
tgtgaagtggaagccactgtgggagaagttgttacaaatacatggctggttacttgcata
gactatcagactttgtttgatccaaagtcgaatcctctcttcacaccagttccagtaatg
acaggaatgactcctttagaggattgtgttatttcatttagccagtgtgctggagcagaa
aaagagtctttaacattcctagcaaacctccttggagcaagtgttcaagaatactttgtt
cgcaaatccaatgcaaagaaaggcatgtttgccagtactcatcttatactgaaagaacgt
ggtggctctaaatatgaagctgcaaagaagtggaatttacctgccgttactatagcttgg
ctgttggagactgctagaacgggaaagagagcagacgaaagccattttctgattgaaaat
tcaactaaagaagaacgaagtttggaaacagaaataacaaatggaatcaatctaaattca
gatactgcagagcatcctggcacacgcctgcaaactcacagaaaaaccgtcgttacacct
ttagatatgaaccgctttcagagtaaagctttccgtgctgtggtctcacaacatgccaga
caggtcgcagcctccccagcagtaggacaaccacttcagaaggagccctcgttacacctg
gatacaccatcaaaattcctgtccaaggacaaactcttcaagccttcctttgatgtgaag
gatgcacttgcagccttggaaactccaggacgtcccagccaacagaaaaggaaaccgagt
acgccactctcagaagttattgtcaaaaacttgcaacttgctttggcaaatagctctcga
aatgctgtcgctctttctgccagccctcaactgaaagaggcccagtcagagaaggaagaa
gccccaaagccacttcacaaagtagtggtatgtgttagtaaaaaactcagtaagaagcag
agtgaactaaatgggatcgcagcctctctaggagcagattacaggtggagttttgatgaa
acagtgactcatttcatctatcaagggcggccaaatgacactaatcgggagtataaatct
gtaaaagaaagaggagtacacattgtttccgagcactggcttttagattgtgcccaagag
tgtaaacatcttcctgaatctctttatccacatacttataatcccaaaatgagcttggat
atcagcgcagtgcaagatggccggctctgtaatagtcgactactctcagctgtgtcttca
acaaaggatgatgagccagatcctttgattttagaagaaaatgatgtagacaatatggcc
accaataataaagagtcagcaccatcaaatggaagtggaaagaatgactctaaaggagtt
ctgacacagaccttagagatgagagagaactttcagaagcagttacaggagataatgtct
gcaacatcaatagtgaaaccccaagggcagaggacttccctttcaagaagtggttgtaac
agcgcatcttcaacccctgacagcactcgctctgctcgcagtggacgaagtagagtccta
gaggcactgaggcagtctcgtcagacagtacctgatgtcaacacagagccttcccaaaat
gaacagatcatttgggatgaccctacagcaagggaggagagagcaaggcttgccagcaat
ttgcagtggcctagttgtcccacacaatactctgagcttcaggttgacattcaaaacttg
gaggattctccttttcaaaagcctttacatgattcagaaattgctaaacaggctgtctgt
gatcctggaaacatacgtgtgactgaagctcccaaacacccaatctctgaagaactggaa
actcccataaaagacagccacctgatccctacgcctcaagcccccagtattgcctttcca
ctcgccaacccccctgtggctccgcaccctagagaaaagattataacgatagaggagact
catgaagaattaaaaaaacagtacatatttcagttatcatctctgaatcctcaagaacgt
attgactattgtcatctgattgagaaactaggtggattggtgatagaaaagcagtgcttt
gatcccacctgtacacacattgttgtgggacatccacttcgaaacgagaagtatttagcc
tcagtggcagctgggaagtgggtgcttcatcgctcctaccttgaagcctgcaggactgct
ggacacttcgtgcaggaagaagactatgaatggggaagtagttccatacttgatgttctg
actggaatcaatgtacagcaacgaagactagcacttgcagcaatgagatggagaaaaaaa
atccagcaaagacaagaatctggcattgttgagggagcatttagtgggtggaaggttatt
ttacatgtggatcagtctcgagaagcaggcttcaaacgccttcttcagtcaggaggagca
aaggtgctacctggtcattctgtacctttatttaaagaggccacacatcttttttctgac
ttgaataaactgaaaccagatgactcaggagttaatatagcagaagctgctgcccagaac
gtgtactgcttgagaacagaatacattgctgattatctcatgcaggaatcacctcctcat
gtagaaaattactgtctaccagaagctatttcatttattcagaataataaggaacttggg
actggattatcacaaaagaggaaagctcctacagaaaaaaataaaatcaaacgacctaga
gtacactaa

KEGG   Homo sapiens (human): 378708
Entry
378708            CDS       T01001                                 
Symbol
CENPS, APITD1, CENP-S, FAAP16, MHF1
Name
(RefSeq) centromere protein S
  KO
K11511  centromere protein S
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01464  Fanconi anemia pathway
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    378708 (CENPS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    378708 (CENPS)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    378708 (CENPS)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     378708 (CENPS)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     378708 (CENPS)
SSDB
Motif
Pfam: CENP-S CENP-T_C Histone TFIID-31kDa COMMD1_N DASH_Dad2 Bromo_TP DUF4087
Other DBs
NCBI-GeneID: 378708
NCBI-ProteinID: NP_954988
OMIM: 609130
HGNC: 23163
Ensembl: ENSG00000175279
UniProt: Q8N2Z9
Structure
LinkDB
Position
1:10430433..10442808
AA seq 138 aa
MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN
FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED
GSKNSRQPAEAGVVESEN
NT seq 417 nt   +upstreamnt  +downstreamnt
atggaggaggaggcggagaccgaggagcagcagcgattctcttaccaacagaggctaaag
gcagcagttcactatactgtgggttgtctttgcgaggaagttgcattggacaaagagatg
cagttcagcaaacagaccattgcggccatttcggagctgactttccgacagtgtgaaaat
tttgccaaagaccttgaaatgtttgcaagacatgcgaaaagaaccacaattaacactgaa
gatgtgaagctcttagccaggaggagtaattcactgctaaaatacatcacagacaaaagt
gaagagattgctcagattaacctagaacgaaaagcacagaagaaaaagaagtcagaggat
ggaagcaaaaattcaaggcagccagcagaggctggagtggtggaaagtgagaattaa

KEGG   Homo sapiens (human): 201254
Entry
201254            CDS       T01001                                 
Symbol
CENPX, CENP-X, D9, FAAP10, MHF2, STRA13
Name
(RefSeq) centromere protein X
  KO
K15360  centromere protein X
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01464  Fanconi anemia pathway
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    201254 (CENPX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    201254 (CENPX)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     201254 (CENPX)
SSDB
Motif
Pfam: CENP-X CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 201254
NCBI-ProteinID: NP_001257935
OMIM: 615128
HGNC: 11422
Ensembl: ENSG00000169689
UniProt: A8MT69
Structure
LinkDB
Position
17:complement(82018703..82022878)
AA seq 81 aa
MEGAGAGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAE
DALRVDVDQLEKVLPQLLLDF
NT seq 246 nt   +upstreamnt  +downstreamnt
atggagggagcaggagctggatccggcttccggaaggagctggtgagcaggctgctgcac
ctgcacttcaaggatgacaagaccaaagtgagcggggacgcgctgcagctcatggtggag
ttgctgaaggtcttcgttgtggaagcagcagtccgcggcgtgcggcaggcccaggcagaa
gacgcgctccgtgtggacgtggaccagctggagaaggtgcttccgcagctgctcctggac
ttctag

KEGG   Homo sapiens (human): 91442
Entry
91442             CDS       T01001                                 
Symbol
FAAP24, C19orf40
Name
(RefSeq) FA core complex associated protein 24
  KO
K10898  fanconi anemia-associated protein
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
  Element
N01464  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    91442 (FAAP24)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    91442 (FAAP24)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     91442 (FAAP24)
SSDB
Motif
Pfam: PND HHH_2 HHH_5 Rad10 IMS_HHH_1 5_3_exonuc
Other DBs
NCBI-GeneID: 91442
NCBI-ProteinID: NP_689479
OMIM: 610884
HGNC: 28467
Ensembl: ENSG00000131944
UniProt: Q9BTP7 A0A0S2Z5V6
Structure
LinkDB
Position
19:32972242..32978229
AA seq 215 aa
MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILY
VTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVA
SQMEASCLVIQLVQEQTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQK
FPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQPR
NT seq 648 nt   +upstreamnt  +downstreamnt
atggaaaagaacccccctgatgatacgggccccgtgcacgtgcctttggggcatattgtg
gccaatgagaaatggcgcgggtcacagctggcgcaggagatgcaagggaaaattaagctc
attttcgaggatggcttgacaccagacttttatctgtcgaacagatgctgcattctttat
gtcaccgaagctgatttggtggcaggaaatggctacagaaagaggcttgttcgggttaga
aattccaataatcttaaaggaattgtagtcgttgaaaaaacccggatgagtgaacaatac
ttcccagccctacagaagtttactgtgctggaccttggaatggtgctgcttccagtggcc
agccagatggaagcatcctgcctcgtcatccagttggttcaagagcaaaccaaagagccc
agtaagaaccctcttctcgggaagaaacgggccctgctgctgtctgagccttcgctcctt
cgaaccgtgcagcagatcccaggagttggaaaagttaaagctccccttctcctccagaag
tttccaagcatccagcaactgagtaatgcttccattggggaactggagcaggtggtcgga
caagcagtggcacagcagatccatgccttcttcacgcagcccaggtga

DBGET integrated database retrieval system