KEGG   Homo sapiens (human): 5927
Entry
5927              CDS       T01001                                 
Symbol
KDM5A, NEDEHC, RBBP-2, RBBP2, RBP2, JARID1A
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hsa  Homo sapiens (human)
Disease
H02803  Neurodevelopmental disorder with histone modification defect
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    5927 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    5927 (KDM5A)
Enzymes [BR:hsa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     5927 (KDM5A)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     5927 (KDM5A)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    5927 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_5 PHD_JHD1 PHD_2 PHD_Pygo
Other DBs
NCBI-GeneID: 5927
NCBI-ProteinID: NP_001036068
OMIM: 180202
HGNC: 9886
Ensembl: ENSP00000382688.2
UniProt: P29375
Structure
LinkDB
Position
12:complement(280057..389320)
AA seq 1690 aa
MAGVGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPNLDLKEKVEPEVLSTDTQTSPEPGTRMNILPKRTRRVKTQSESGDVSRNTELKKLQ
IFGAGPKVVGLAMGTKDKEDEVTRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG
RGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECSKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRY
PLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYPENDL
FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQ
ARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGSNYAYL
EQLESLSAKGRPIPVRLEALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GVYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEA
MHSLRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPSFQQSA
FNRVVSSVSSSPRQTMDYDDEETDSDEDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKVKGKD
SSEKKRKRKLEKVEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKELNKLAKKLAKEEE
RKKKKEKAAAAKVELVKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPVSPGPAPPPSFIMSYK
LPMEDLKETS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcgggcgtggggccggggggctacgcggcggagttcgtgccaccgccagagtgcccc
gtctttgagccgagttgggaggagttcacagatccgctcagctttatcggccgcatccgg
cctttggcggagaaaaccggcatctgcaaaattcggccgcccaaggactggcagcctcca
tttgcctgtgaagtaaaaagctttcgtttcactccaagagtccagcgcctgaatgaactt
gaggcaatgaccagagtgagattggatttcttggatcaactagcaaaattttgggaactt
caaggatctactctgaagatccctgtggtagagagaaaaatcctggatctgtatgctttg
agcaagattgttgccagcaaaggaggttttgaaatggtcaccaaagagaagaaatggtct
aaagtgggtagtcgcttgggatatctgccaggaaaaggaactgggtctcttttgaagtca
cattatgaaagaattctctacccatatgagcttttccagtctggtgtgagccttatgggt
gtgcagatgcctaatttagatcttaaagaaaaagtggagcctgaggttctcagcactgat
acccaaacttccccagagccaggcacaaggatgaacattctgccgaagagaacaagacgt
gtgaagactcagtcagaatctggagatgtgagtagaaacacggaactgaagaaacttcag
atttttggggctgggcccaaggttgtgggcttggcaatgggaacaaaagataaagaagat
gaggtcacccgaagacgaaaagttaccaacaggtcagacgcatttaacatgcaaatgaga
caacggaaaggcactctctctgttaactttgttgatctctatgtttgtatgttttgtggt
cggggaaacaatgaagataaattgcttttgtgtgatggatgtgatgacagctatcataca
ttttgtctaattcctccactacctgatgtgcccaaaggagactggaggtgtcctaaatgt
gtcgccgaggaatgtagcaaacctcgagaagcctttggatttgaacaagctgtacgagag
tatacacttcagagctttggagagatggcagataattttaagtctgattattttaatatg
ccagtccatatggttcccacagaactagtagaaaaggaattttggcggctggtaagcagc
attgaagaagatgttattgtggaatatggagcagatatctcctcaaaagactttggaagt
ggatttccggtgaaggatgggcggagaaagattctgccagaagaagaggaatatgcactt
tctggttggaatttgaataacatgcctgtcctggaacagtctgttcttgcacatattaat
gtggacatctctggtatgaaagtgccgtggctctatgtgggaatgtgcttctcttctttt
tgctggcacattgaggatcactggagttattccatcaactacttgcactggggggagcca
aagacatggtatggtgtgccatctcatgctgcagagcaactggaggaggtgatgagagag
ctggcccccgagttatttgaatcccagcctgatcttctgcatcagttagttaccatcatg
aaccccaacgtgctaatggagcatggtgtgcctgtgtacaggaccaatcagtgtgctggc
gagtttgttgtgacatttcctcgtgcctatcactctggatttaaccagggctacaacttt
gctgaagctgtgaacttctgtactgctgactggttgcccattggacgtcaatgtgtaaat
cattaccgacgcctaaggcgccactgtgtcttttcacacgaggaactaattttcaagatg
gcagcagatccagaatgcttagatgtggggctggctgccatggtctgcaaagaattgact
ctcatgactgaagaagaaacacgattaagagagtctgttgtacagatgggtgtcctgatg
tcagaagaagaagtgtttgaacttgttcctgatgatgagcggcagtgttcagcatgcaga
accacatgttttctctctgctctcacatgttcctgtaatcctgagcggcttgtatgtctc
taccatccaactgatctgtgcccctgccccatgcagaagaaatgtcttagatatcgctac
ccattagaagacctcccttctctgctatatggtgtaaaagtcagggcacagtcctatgac
acttgggtcagtcgtgttacagaagcattgtctgctaacttcaaccacaaaaaagatttg
attgaattgcgagtaatgctggaagatgctgaggataggaaatacccagagaatgatctc
tttcgaaaactcagggatgctgtaaaagaagctgagacctgtgcttctgtggctcagctg
cttctgagcaaaaagcagaaacacagacagagcccagatagtgggaggactcggaccaaa
ctgacagtggaagaattgaaggcctttgtccaacaactttttagtcttccgtgtgtcatc
agccaagctcggcaagtaaagaatctgctagatgatgtggaagagtttcatgaacgtgct
caggaggccatgatggatgaaaccccagattcttccaaactccagatgttgatagatatg
ggctctagtctctatgtggaactccctgaattaccacgactgaagcaagagctacaacag
gctcggtggttggacgaagtaagactgaccttatcagatccgcaacaagtcactttggat
gtcatgaagaagctgatagactctggggtagggttggcaccccaccatgctgtggagaaa
gcaatggctgaactacaggagctccttacagtctctgaacgatgggaagaaaaggctaag
gtctgcctacaggcaagaccgaggcacagtgtggcaagtttagaaagcattgtgaatgaa
gccaagaacattccagcctttctacccaatgtgttgtccttgaaagaagccttacaaaag
gctcgagaatggaccgctaaagtggaagctattcagagtggcagcaattacgcttatttg
gagcagcttgagagcttgtctgcgaaaggacgccctattcctgtgcgtcttgaagcactg
ccgcaagtggaatcacaggtagcagcagcacgggcatggagagaacggactgggcggacg
tttcttaagaagaattctagccatacattgttacaggtgctgagcccccggaccgacatt
ggtgtatatgggagtggcaaaaataggaggaaaaaagtaaaagaactaatagaaaaagaa
aaagaaaaggatctggacctggagcctctgagtgatctggaggaaggattggaggaaacc
agagatacagccatggtggtggcagttttcaaagaacgggagcaaaaagagattgaagcc
atgcattctctcagagcagccaacctagccaagatgacaatggtggaccgcatagaagaa
gtaaaattttgcatttgccgcaagacagccagtgggtttatgctacagtgtgagctctgc
aaagactggttccataacagctgtgttcctcttcctaaatcaagttcccaaaaaaaagga
tccagctggcaagctaaagaagtaaaattcctttgccctctttgtatgcggtctcgaagg
cccaggctagagactattctgtcactcctggtatcccttcagaagttgcccgtacggttg
cctgaaggagaggccctgcagtgtttgacagaacgtgctatgagttggcaagatagagcg
cggcaggctctagccacagatgaactatcctctgccctggccaaactatctgtgttgagc
cagcgtatggtggaacaggcggctcgagaaaaaactgaaaagatcatcagtgcagaactc
caaaaagcagctgccaatccagacttacagggacacttacctagtttccagcagtctgct
tttaaccgggtggtgagcagtgtgtcatcttctcctcgacaaacaatggactatgatgat
gaagaaacagactctgatgaagacattcgagagacatatggctacgacatgaaggacaca
gccagtgtgaagtcctctagtagtcttgaacccaatcttttttgtgatgaagagattccc
atcaaatccgaggaggtggtgacccacatgtggacagcaccttcattttgtgcagagcat
gcttattcttctgcttctaagagttgttctcaaggttctagcaccccaaggaaacaacct
cggaagagccctttggtgccccgaagtttggaacctccagtgctggagttgtcacctgga
gctaaggcacaactggaagaacttatgatggttggagatctcctggaagtatctctggac
gagactcaacacatatggcggattttgcaggccacacacccaccctctgaagacagattc
ttgcatatcatggaggatgacagcatggaagagaaaccactaaaagtgaaaggaaaggac
tcttcagagaagaaacggaaacggaagctagaaaaggtagagcaactttttggagaagga
aaacagaagtccaaggagttaaagaaaatggacaaacctagaaagaagaaattaaaatta
ggtgcagacaaatcaaaggagctgaataaactggccaagaaactagcaaaagaagaagag
agaaagaaaaagaaggagaaggctgctgcagccaaagttgaacttgtgaaagagagcact
gaaaagaaaagagagaaaaaggtgctggacatcccctcaaagtatgactggtcaggagca
gaggagtctgatgatgagaatgctgtgtgcgcagcacagaactgccaaaggccctgcaag
gacaaggtagactgggtacaatgtgatggtggctgtgatgagtggtttcatcaagtttgt
gtgggtgtatctccagaaatggctgaaaatgaagattacatctgtataaactgtgcaaag
aagcaggggccagttagcccaggtccagcaccacctccttccttcataatgagctacaaa
ctaccaatggaggatcttaaagagaccagttag

KEGG   Homo sapiens (human): 10765
Entry
10765             CDS       T01001                                 
Symbol
KDM5B, CT31, JARID1B, MRT65, PLU-1, PLU1, PPP1R98, PUT1, RBBP2H1A, RBP2-H1
Name
(RefSeq) lysine-specific demethylase 5B isoform 2
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hsa  Homo sapiens (human)
Disease
H00768  Autosomal recessive intellectual developmental disorder
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    10765 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    10765 (KDM5B)
Enzymes [BR:hsa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     10765 (KDM5B)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     10765 (KDM5B)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    10765 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_Pygo zf-PHD-like PHD_2 PHD-1st_NSD Lipoprotein_20 PHD_JHD1
Other DBs
NCBI-GeneID: 10765
NCBI-ProteinID: NP_006609
OMIM: 605393
HGNC: 18039
Ensembl: ENSP00000356234.3
UniProt: Q9UGL1
Structure
LinkDB
Position
1:complement(202724495..202808421)
AA seq 1544 aa
MEAATTLHPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQEPIERKDYIVENEKEKPKSRS
KKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEETPSAAELQDLLDVSFEF
DVELPQLAEMRIRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDW
LQDVEGLQAGGRVPVLDTLIELVTRGRSIPVHLNSLPRLETLVAEVQAWKECAVNTFLTE
NSPYSLLEVLCPRCDIGLLGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALTESKETAS
AMATLGEARLREMEALQSLRLANEGKLLSPLQDVDIKICLCQKAPAAPMIQCELCRDAFH
TSCVAVPSISQGLRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKFVQDRVGSGLLYSRWQASAGQVSDTNKVSQPPGTTSFSLPDDWD
NRTSYLHSPFSTGRSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTLLAKPSPAQQT
DRSSPVRPSSEKNDCCRGKRDGINSLERKLKRRLEREGLSSERWERVKKMRTPKKKKIKL
SHPKDMNNFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq 4635 nt   +upstreamnt  +downstreamnt
atggaggcggccaccacactgcacccaggcccgcgcccggcgctgcccctcgggggcccg
ggcccgctgggcgagttcctgcctccacccgagtgcccggtcttcgaacccagctgggaa
gagttcgcggaccccttcgctttcatccacaagatccggcccatagccgagcagactggc
atctgtaaggtgcggccgccgccggattggcagccaccatttgcatgtgatgttgataaa
cttcattttacgccacgtatccagagactgaatgaattggaggcccaaactcgtgtaaaa
ttgaatttcttggaccagattgcaaagtactgggagttacagggaagtactctgaaaatt
ccacatgtggagaggaagatcttggacttatttcagcttaataagttagttgcagaagaa
ggtggatttgcagttgtttgcaaggatagaaaatggaccaaaattgctaccaagatgggg
tttgctcctggcaaagcagtgggctcacatatcagagggcattatgaacgaattctcaac
ccctacaacttattcctgtccggagacagcctaaggtgtttgcagaagccaaacctgacc
acagacactaaggacaaggagtacaaaccccatgatattccccagaggcagtctgtgcag
ccttcggaaacgtgccccccagcccgacgagcaaaacgcatgagagcagaggccatgaat
attaaaatagaacccgaggagacaacggaagccagaactcataatctgagacgtcgaatg
ggttgtccaactccaaaatgtgaaaatgagaaagaaatgaagagtagcatcaagcaagaa
cctattgagaggaaagattatattgtagaaaatgagaaggaaaagcccaagagtcgatct
aaaaaagccaccaatgctgtggacctgtatgtctgtcttttatgtggcagtggcaatgat
gaagaccggctactgttgtgtgatggctgtgatgacagttaccataccttttgcttgatc
ccacctctccatgatgttcccaagggagactggaggtgtcctaagtgtttggctcaggaa
tgtagtaagccacaagaagcatttggctttgaacaagcagccagggactataccctccgt
acttttggggaaatggcagatgcgttcaaatctgattacttcaacatgccagtccatatg
gtccccacagagcttgttgagaaagaattttggagactagtaagcactattgaggaggat
gtcacagtggaatatggagctgacattgcctcaaaggaatttggcagtggctttcctgtc
cgagatgggaaaatcaaactctcacctgaggaagaggagtatcttgatagtggctggaat
ttgaacaacatgccagtgatggagcagtctgtccttgcacatattactgctgatatatgt
ggcatgaaacttccttggttgtatgtgggaatgtgcttttcttcattctgttggcacatt
gaagaccactggagctattcaattaactacttgcactggggtgagccaaaaacctggtat
ggagtcccagggtatgctgctgagcagctagaaaatgtaatgaagaaactagctccagaa
ctctttgtgtcccagccggatctcctccatcagcttgtgaccatcatgaaccccaatacc
ctgatgactcatgaagtgcctgtttaccgaactaatcagtgtgctggggagtttgtgatt
acatttccaagagcctaccacagtggttttaaccagggttttaattttgctgaggctgtt
aacttctgcactgttgattggctgccattaggccgacagtgtgtggagcattatcgcttg
cttcatcgatattgtgtgttttcccacgatgagatgatctgcaagatggcttccaaggct
gatgtattagatgttgtagtggcttcaactgttcagaaagacatggccattatgattgag
gatgagaaagctttaagagaaactgtccgtaaattgggagtgattgattcggaaagaatg
gattttgagctgttgccagatgatgaacgtcagtgtgtaaaatgcaaaactacatgcttc
atgtctgccatctcctgttcttgtaaacctggccttcttgtttgcctgcatcatgtaaaa
gaattgtgttcctgtcctccttacaaatataaattgcggtataggtacacgctggatgat
ctctaccctatgatgaatgcattgaagcttcgagcagaatcttacaacgaatgggccttg
aatgtgaatgaagctttggaggcaaagatcaacaagaagaaaagccttgtcagcttcaag
gctttaattgaagaatctgaaatgaagaaattcccagacaatgatcttttgcgacacctt
cgcctagtcacacaggatgcagagaagtgtgcctctgttgcgcagcagttgcttaatggc
aaaaggcaaactagatatcgatctggtggagggaaatcccaaaatcagttgacagtgaat
gagctccggcagtttgtaacacagctgtatgctcttccatgtgtcctcagtcagacacca
ttactaaaggatctcttgaatcgtgtagaagattttcaacagcatagtcagaaactactc
tctgaggaaacgcctagtgctgcggagctgcaggacttgctagatgtcagctttgaattt
gatgttgaacttccacagcttgctgagatgcgtatccgtttggaacaagcccgttggcta
gaagaggtgcagcaagcttgcctagaccccagctcccttactttagatgatatgagacgt
ctcatagacctaggggtagggctggccccgtattcagcagtggagaaagctatggcccgg
ctgcaggaactgctcacagtgtcagagcactgggacgacaaagccaagagtctcctcaag
gccaggccacgacattcattgaatagccttgctacggcagtaaaggaaatcgaagagatc
cctgcatatctgcccaatggtgcggctctgaaagactcagtgcagagagccagagactgg
cttcaggatgtagagggcctgcaggctggaggacgtgtgccagtgttagacacactcata
gaacttgttacacgaggccgatctatccccgtacatctgaattctttgccaagactggaa
accctagtagctgaggttcaggcttggaaagaatgtgctgttaatacattcttgactgag
aattctccatattctctcttagaggtgctgtgtcctcgatgtgatattggccttttggga
ttgaaaaggaagcagagaaagttaaaggagcccttgccaaatggaaagaaaaaaagcacc
aaattagagagtctgagtgacctggagagagctttaactgaaagcaaggagactgcttca
gctatggcaactcttggggaagctcgcctaagggaaatggaagccttgcagtctctcaga
ctcgccaatgaagggaaattgctgtcgcctctccaagatgtggatataaaaatctgccta
tgtcagaaggccccagctgcccctatgattcaatgtgaactctgcagggatgctttccac
accagttgtgtggcggtacccagtatttcacagggcctgcgaatctggctttgtccccat
tgtcggaggtcagagaaacctccattagagaaaattctgcccctgctcgcctcccttcag
cgtatccgagttcgccttcctgagggagatgcacttcgatatatgattgaaagaaccgtg
aactggcagcacagagcccagcaactgctttcgtcagggaatcttaaatttgtgcaagat
cgagtgggctcaggactgttatatagcagatggcaagcctcagcaggacaggtgtcagac
acaaacaaggtatctcaacctcctggcacaacatcattttctttgcctgatgactgggac
aacagaacctcatatttgcactcccccttctcaactggacgaagttgtatccccctccat
ggtgttagtccagaagtgaatgaactattgatggaagcccagctgctccaggtatccctt
cctgaaattcaggaactttaccagactttacttgcaaagccaagccctgctcagcagact
gaccgaagctcaccagtgagacccagcagtgagaagaatgactgttgccgagggaagcga
gatggaattaacagtcttgagagaaaactgaagagacgcctggaaagagagggcctctcc
agtgagcggtgggaacgagttaagaaaatgcggacccccaaaaagaagaaaatcaaactg
agccaccccaaggacatgaacaatttcaagttagagagagagcgtagctatgaattagtt
cgttctgctgaaactcattccctgccctcagacacatcctattccgaacaggaagactct
gaggatgaagatgccatctgcccagctgtgagctgcctgcagccagaaggagatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcatcaggtctgtgttggtgtc
tccccagagatggcagagaaagaagactacatctgtgtgcgctgtactgtgaaggacgca
ccaagccgaaagtaa

KEGG   Homo sapiens (human): 8242
Entry
8242              CDS       T01001                                 
Symbol
KDM5C, DXS1272E, JARID1C, MRX13, MRXJ, MRXS16, MRXSCJ, MRXSJ, SMCX, XE169
Name
(RefSeq) lysine-specific demethylase 5C isoform 1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hsa  Homo sapiens (human)
Disease
H00658  X-linked syndromic intellectual developmental disorder
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    8242 (KDM5C)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    8242 (KDM5C)
Enzymes [BR:hsa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     8242 (KDM5C)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     8242 (KDM5C)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    8242 (KDM5C)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD PHD_JHD1 PHD_UBR7-like PHD_ash2p_like
Other DBs
NCBI-GeneID: 8242
NCBI-ProteinID: NP_004178
OMIM: 314690
HGNC: 11114
Ensembl: ENSP00000364550.4
UniProt: P41229
Structure
LinkDB
Position
X:complement(53176277..53225207)
AA seq 1560 aa
MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEELGGDVKVESTSPKTFLESKEELSH
SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTEL
VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP
VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
LEVEDGRKRSLEELRALESEARERRFPNSELLQQLKNCLSEAEACVSRALGLVSGQEAGP
HRVAGLQMTLTELRAFLDQMNNLPCAMHQIGDVKGVLEQVEAYQAEAREALASLPSSPGL
LQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASV
APSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIREAENIPVHLPNIQ
ALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
RDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSSTASSTTSICVCGQVLAGAGAL
QCDLCQDWFHGRCVSVPRLLSSPRPNPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
LLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPR
PEEPPNYPAAPASDPLREGSGKDMPKVQGLLENGDSVTSPEKVAPEEGSGKRDLELLSSL
LPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERIRTLLEL
EKAERHGSRARGRALERRRRRKVDRGGEGDDPAREELEPKRVRSSGPEAEEVQEEEELEE
ETGGEGPPAPIPTTGSPSTQENQNGLEPAEGTTSGPSAPFSTLTPRLHLPCPQQPPQQQL
NT seq 4683 nt   +upstreamnt  +downstreamnt
atggagccggggtccgacgatttcctaccgccaccggagtgcccggtgttcgagcctagc
tgggccgagttccgagaccctcttggctacatcgcgaaaatcaggcccatcgcagagaaa
tcgggcatttgcaagatccgcccacccgcggactggcagccaccctttgctgtggaagtg
gacaacttcaggtttaccccccgaatccagaggctgaatgagctagaggcccagacgaga
gtgaaactgaactacttggaccagattgccaaattctgggaaatccagggctcctcctta
aagattcccaatgtagaacggcggatcttggacctctacagtctcagcaaaattgtggtg
gaggaaggtggttatgaagctatctgcaaggaccgtcggtgggctcgggtagcccagcgc
ctcaactatccaccaggcaaaaatattggctccttgctacgctcccactacgaacgcatt
gtttatccctatgaaatgtaccagtctggagccaaccttgtgcagtgtaacacacgtcca
tttgataatgaggagaaggacaaggaatacaaaccccacagcatccccctacgacagtct
gtgcagccttccaagttcaacagctatggccggcgggccaagagactgcagcctgatccg
gaacccacagaggaagacattgagaagaatccagagctgaaaaagctacagatctatggg
gcaggccccaagatgatgggcctgggcctcatggccaaagacaagactctgcggaagaaa
gataaggaggggcctgagtgtccccccacagtagtggtgaaggaggagttaggtggggat
gtgaaggtggagtcaacatcgcctaagaccttcctggagagcaaggaggagctgagtcac
agcccagaaccctgcaccaagatgaccatgaggctacggaggaaccacagcaatgcccag
tttattgagtcatatgtctgccggatgtgttctcgaggggatgaggatgacaagctcctg
ctgtgtgatggctgtgatgacaactaccacatcttctgcctgctgcctcctctgcctgag
atccccaagggtgtctggcggtgcccaaagtgtgtcatggcggagtgtaagcggccccca
gaagcctttggctttgagcaggctacccgggaatacactctgcagagctttggcgagatg
gccgactcctttaaagctgactacttcaacatgcccgtgcatatggtgcccacagaactt
gtggagaaggagttctggaggctggtaaatagcattgaggaagatgtgactgttgagtat
ggagctgacatccattccaaagaatttggcagcggtttccctgtcagtgacagtaaacgg
cacctaacccccgaagaggaggagtatgctaccagtggttggaacctaaatgtgatgccg
gtgttggaacagtctgtactgtgccacatcaatgcagatatctctggcatgaaggtgccc
tggctctacgtgggcatggtcttctcagccttttgctggcatattgaggatcactggagt
tactccattaactacctccactggggtgagccgaagacctggtatggggtgccctcactt
gcagcagaacatttggaagaagtgatgaagaagctgacacctgaactatttgatagccag
cctgacctcctgcaccaacttgtcaccctcatgaatcccaacaccctcatgtcccatggt
gtgccagttgtccgcacaaaccagtgtgcaggagagtttgtcatcaccttcccccgtgct
taccacagcggcttcaaccaaggctacaactttgccgaggctgtcaacttttgcactgct
gactggttgcctgctgggcgccagtgcattgagcactaccgccggctccggagatactgc
gtcttctcccatgaggagcttatctgcaagatggctgcctgcccagagaagctagacctg
aacctggcggcagctgtgcataaggagatgttcatcatggtgcaagaagagcggcgtcta
cgaaaggccctgctggagaagggtatcacagaggctgagcgagaggctttcgagctgctc
ccagatgatgagcgccagtgtatcaagtgcaagactacgtgtttcctgtcagccctggcc
tgctacgactgcccagacggccttgtctgcctttcccacatcaatgatctctgcaagtgc
tccagtagccggcagtacctgcggtatcggtataccttggatgagcttcctgccatgctg
cataagctgaaggttcgggctgagtcctttgacacctgggccaacaaagtgcgagtggcc
ctggaggtggaggatgggcggaagcgcagccttgaagaactgagggcactagagtctgaa
gcccgtgagcggaggtttcctaatagtgagctgctgcagcaactaaagaactgcctgagt
gaggcagaggcttgcgtgtcccgagctctgggactggtcagcggccaggaagctggcccc
cacagggtggctggtctacagatgaccctgactgagctccgggcctttctggaccagatg
aacaacctgccttgcgccatgcaccagattggggatgtcaagggtgttctggaacaggtg
gaggcctaccaggctgaggctcgtgaggccctggcctcactgccctccagtccagggcta
ctgcagtccctgttggagagggggcggcagctgggggtggaggtgcctgaggcccagcag
ctccagcggcaggtggaacaggcgcgatggctggatgaggtgaaacgcacactggccccc
tcagcccgaaggggcaccttggctgtcatgcgaggactgttggtcgcgggtgccagtgta
gcccctagccctgctgtggataaagcccaggccgagctgcaggaactgctgaccattgct
gaacgctgggaggagaaagcccacctctgcctggaggccaggcagaagcatccaccagcc
acacttgaggccataatccgtgaagcggaaaacatccctgttcacctgcccaacatccag
gctctcaaggaggctcttgctaaggcccgggcctggattgctgatgttgatgagatccaa
aatggtgaccactacccctgcctggatgacttggagggcctagtagctgtgggccgggac
ctacctgtggggctggaggagctgagacagctagagctacaggtactgacagcgcactcc
tggagggagaaggcctccaagaccttcctcaagaaaaattcttgctacacgctgctggag
gttctctgcccatgtgcagatgccggctcagacagcaccaagcgcagccggtggatggag
aaggagctggggttgtacaaatctgacacagagctgctggggctgtctgcgcaggacctc
agggacccaggctctgtgatcgtggccttcaaggagggggaacagaaggagaaggagggt
atcctgcagctgcgtcgcaccaattcggccaagcccagtccactggcatcatcgagcacg
gcctcctctacaacctctatctgtgtgtgtgggcaggtgctggctggggcgggagctctg
cagtgtgacctgtgtcaggactggttccatgggcggtgtgtgtcagtgcctcgcctcctc
agctctccgaggcccaatcccacctcatccccactgctggcctggtgggaatgggacacc
aaattcctgtgtccactgtgtatgcgctcaaggcgcccgcgcctggagaccatcctggca
ctgctggtagccctgcagagactgcctgtgcggctgcccgagggcgaggccctgcagtgc
ctcacagagagggccatcagctggcaaggccgcgccaggcaggctctggcctctgaagat
gtgactgctcttttgggacggctggctgagctccgccaacggctacaggctgaacctaga
cctgaggagcctcctaactaccctgcagcccctgcttctgaccccctcagagagggcagt
ggcaaggatatgcctaaggtccagggcttactggagaatggagacagtgtgaccagtcct
gagaaggtagccccggaggagggctcaggtaagagagatctggagctgctgtcctcgctg
ttgccacagttgactggccctgtgttggaactgcctgaggcaacccgggcccccttggag
gagctcatgatggagggggacctgctcgaggtgaccctggatgagaaccacagcatatgg
cagctgctgcaggctggacagcccccagacctggagaggatccgcacacttctggagctg
gagaaggcagagcgtcacgggagtcgggctcggggccgggccctggagaggcggcggcgg
cggaaggtggatcggggtggggagggcgatgacccagcccgagaggagctagagccaaag
agggtacggagctcagggccagaggctgaggaggtccaggaggaggaagagctggaggag
gagactgggggtgagggcccccctgcacccatccccaccactggcagccccagcacccag
gagaaccagaatggcttggaaccggcggaagggaccacttcaggcccctcggcccctttc
tccactctgactccccggctgcatctgccctgcccacagcagccgcctcagcaacagttg
tga

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