Companilactobacillus futsaii: FG051_02775
Help
Entry
FG051_02775 CDS
T06830
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lft
Companilactobacillus futsaii
Pathway
lft03030
DNA replication
lft03410
Base excision repair
lft03420
Nucleotide excision repair
lft03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FG051_02775 (ligA)
03410 Base excision repair
FG051_02775 (ligA)
03420 Nucleotide excision repair
FG051_02775 (ligA)
03430 Mismatch repair
FG051_02775 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lft03032
]
FG051_02775 (ligA)
03400 DNA repair and recombination proteins [BR:
lft03400
]
FG051_02775 (ligA)
Enzymes [BR:
lft01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FG051_02775 (ligA)
DNA replication proteins [BR:
lft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FG051_02775 (ligA)
DNA repair and recombination proteins [BR:
lft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FG051_02775 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FG051_02775 (ligA)
MMR (mismatch excision repair)
DNA ligase
FG051_02775 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FG051_02775 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
RTT107_BRCT_5
BRCT_2
Zn_ribbon_NUD
Mer2
Motif
Other DBs
NCBI-ProteinID:
QCX24090
UniProt:
A0A5B7T0H4
LinkDB
All DBs
Position
562640..564655
Genome browser
AA seq
671 aa
AA seq
DB search
MADLTKEQASQELDKIRPQLNSWRDAYYTKDAPVVEDNVYDKLYNRLLEIEQMYPELVTP
DSPSQQVGDVTLPDFNKVTHDIPMLSMGDVFSEEELAEFNDRIEKNVGHEVDYNVELKID
GLSLSLIYENGILVQGSTRGNGTIGENVTENVKTIKDIPQKLSRPLSIEVRGECFMSKKE
FLRLNQERENEGQQVFANPRNAAAGSLRQLDPKITASRKLDTFMYTIVTFDGMDVTTQHQ
ALETLKELGFNVNPTAQVTTGLKGVQNFIEHYGEVRDDLDYGIDGVVLKVDDLALQQQLG
NTVKVPRWEIAYKFPPEQSETIVRDITWTIGRTGVLTPTAVMDPVQLAGTTVSRATLHNE
DMIRQKDVRIGDTVLLHKAGDIIPEVSQVVLKKRPKDSTPAEIPTHCPYCGSELIHLEDE
VALRCINPKCPAQVKEQLTHFASRNAMNIDGLGPKIIEQLYTKELVKDVADIYKLTADDL
ATLDGFKEKSINNLLTAIDNSKSNSVERLIFGLGIRHVGAKAGRILAENFGNLDNLMAAS
KEEILEVNTMGEIIADSIVTYFANDDVKKLINELKSVSINMNFIGSSNSNETNSHFTDKI
IVITGTLQNYKRSQLSEKLENLGAKVTSSVTKKTDILIAGEKAGSKLTKAQQLGTQIIDE
TTLSEYLDDEE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttaactaaagaacaagctagtcaagaattagacaaaatccgtccccaactc
aatagttggcgtgatgcttattacactaaagatgcaccagtcgtagaagataatgtctac
gataagttatacaatcgtttattagaaatagaacaaatgtatccggaattagtaactccc
gattcaccttcgcaacaagttggtgatgtgactttacccgatttcaataaggttactcat
gatattccaatgctttcaatgggggatgtcttttctgaagaagaattggcagaatttaat
gaccgaatcgaaaaaaacgttggacatgaggttgattataatgttgaattaaaaattgat
ggtttatcactgtcattaatttatgaaaatggtatcttagttcaaggttcaactcgtggt
aatgggacaatcggcgaaaatgtgacagaaaatgtcaaaactatcaaagatatcccgcaa
aaactcagccgtccactttcaattgaagttcgtggcgaatgtttcatgtcgaaaaaagaa
tttttgcgtttaaatcaagaacgtgaaaatgaaggtcaacaagtctttgctaaccctaga
aatgcggccgcaggtagtttgcgacaattagatcctaagattacggcttcaagaaagctc
gacacgttcatgtatacgatcgtaacttttgacggtatggacgttaccacgcagcatcaa
gctttggaaacattaaaagaattagggtttaacgttaatccaactgctcaagtaacgact
ggtttaaaaggtgtgcaaaactttatcgaacattatggcgaagttcgagatgatctagat
tacggtatcgatggagttgttttgaaagttgatgatttagctttgcagcaacaacttgga
aatacagttaaagtaccacgttgggaaattgcttataagtttccaccagaacaatcagaa
acaatagtacgagatattacttggacaattggtcggacaggagttttgacacctacagca
gtaatggatcctgtgcaattagcaggaacgactgtttcaagggcaacgctacataatgaa
gatatgattcgtcaaaaagatgttcgaatcggcgatactgtactgttgcacaaagccggc
gatattatccctgaagtttcacaagtagtcttgaagaaacgtccaaaagattccacacct
gctgaaatcccaacacattgtccttactgtggttcagaattgattcacctagaggatgaa
gtagcgttacgttgtatcaatcctaaatgtccggctcaagttaaagaacaattaactcac
tttgcttctcgaaatgcgatgaatatagacggtttaggacctaagatcatcgaacaactc
tatacgaaagaattagttaaagatgtagctgatatttacaaattgacagcagatgattta
gccactttggatggttttaaagaaaaatccatcaacaatttactaacagcaattgataat
tctaagagtaattcggtagaacgattgatctttggtcttggaatcagacatgttggtgcc
aaagctggtcggattttagctgagaattttggtaatttagataatttgatggcagcttcc
aaagaagaaattttagaagttaatacaatgggtgaaattattgctgacagtattgtgact
tattttgccaatgatgatgttaaaaaattgataaatgaactaaaatcagtaagtattaac
atgaattttatcggtagttcaaattctaatgaaacaaatagccattttactgataaaata
attgttataaccggaactttacaaaattataaacgctcgcaattgtctgaaaaactcgag
aatctcggtgccaaggtcactagctcagttaccaagaaaactgatattttgattgctggt
gaaaaggccggtagtaaactgactaaagctcaacaattgggaacgcaaattattgatgaa
acaacattatctgaatatttggatgatgaagagtag
DBGET
integrated database retrieval system
