KEGG   PATHWAY: mlf03050
Entry
mlf03050                    Pathway                                
Name
Proteasome - Myotis lucifugus (little brown bat)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mlf03050  Proteasome
mlf03050

Other DBs
GO: 0000502
Organism
Myotis lucifugus (little brown bat) [GN:mlf]
Gene
102417682  PSMB1; proteasome subunit beta type-1 isoform X1 [KO:K02732] [EC:3.4.25.1]
102417881  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
102418272  POMP; proteasome maturation protein [KO:K11599]
102418407  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
102419406  PSMC3; 26S proteasome regulatory subunit 6A [KO:K03065]
102419566  ADRM1; proteasomal ubiquitin receptor ADRM1 isoform X1 [KO:K06691]
102419646  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
102421233  SEM1; LOW QUALITY PROTEIN: 26S proteasome complex subunit SEM1 [KO:K10881]
102421860  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
102422161  PSMB8; proteasome subunit beta type-8 isoform X2 [KO:K02740] [EC:3.4.25.1]
102422333  PSME4; proteasome activator complex subunit 4 isoform X2 [KO:K06699]
102422700  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
102422814  PSMB10; proteasome subunit beta type-10 isoform X1 [KO:K02733] [EC:3.4.25.1]
102422914  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
102423217  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
102424282  [KO:K03061]
102425427  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 isoform X1 [KO:K03037]
102425460  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
102425716  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 isoform X1 [KO:K03030]
102425755  PSMA1; proteasome subunit alpha type-1 isoform X2 [KO:K02725] [EC:3.4.25.1]
102426237  [KO:K11599]
102426547  PSME2; proteasome activator complex subunit 2 isoform X1 [KO:K06697]
102427180  PSME1; proteasome activator complex subunit 1 [KO:K06696]
102427406  PSMA6; proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
102428399  PSMC4; 26S proteasome regulatory subunit 6B [KO:K03063]
102428423  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 isoform X1 [KO:K03032]
102430693  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
102431508  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
102432769  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 isoform X1 [KO:K03036]
102432905  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
102433370  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
102433715  PSMC1; 26S proteasome regulatory subunit 4 isoform X2 [KO:K03062]
102435519  PSMF1; proteasome inhibitor PI31 subunit isoform X1 [KO:K06700]
102435851  PSMB2; proteasome subunit beta type-2 isoform X1 [KO:K02734] [EC:3.4.25.1]
102436883  PSMD7; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
102437849  PSMA8; proteasome subunit alpha type-7-like [KO:K02731] [EC:3.4.25.1]
102438435  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
102438946  IFNG; interferon gamma [KO:K04687]
102439127  PSMC5; LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 8 [KO:K03066]
102439667  PSMB7; proteasome subunit beta type-7 isoform X1 [KO:K02739] [EC:3.4.25.1]
102440708  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
102441316  PSME3; proteasome activator complex subunit 3 isoform X2 [KO:K06698]
102441448  PSMC6; 26S proteasome regulatory subunit 10B isoform X1 [KO:K03064]
102441550  PSMA3; proteasome subunit alpha type-3 isoform X1 [KO:K02727] [EC:3.4.25.1]
102442226  [KO:K06691]
102442870  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
102443262  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 isoform X1 [KO:K03028]
102443295  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
mlf04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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