KEGG   PATHWAY: mlx03050
Entry
mlx03050                    Pathway                                
Name
Proteasome - Mirounga leonina (Southern elephant seal)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mlx03050  Proteasome
mlx03050

Other DBs
GO: 0000502
Organism
Mirounga leonina (Southern elephant seal) [GN:mlx]
Gene
117999772  [KO:K03061]
117999966  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
118000336  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
118000345  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
118001023  SEM1; 26S proteasome complex subunit SEM1 [KO:K10881]
118001397  PSMB8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
118001398  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
118001772  [KO:K02732] [EC:3.4.25.1]
118001885  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
118002313  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
118002372  PSMC1; 26S proteasome regulatory subunit 4 [KO:K03062]
118002671  PSMC6; 26S proteasome regulatory subunit 10B isoform X1 [KO:K03064]
118002818  [KO:K02730] [EC:3.4.25.1]
118002837  [KO:K11599]
118002863  [KO:K02730] [EC:3.4.25.1]
118002883  [KO:K11599]
118003155  [KO:K11599]
118003193  PSME1; proteasome activator complex subunit 1 [KO:K06696]
118003203  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
118003498  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
118003731  PSME2; proteasome activator complex subunit 2 [KO:K06697]
118004315  PSMA1; proteasome subunit alpha type-1 isoform X1 [KO:K02725] [EC:3.4.25.1]
118004526  PSMA8; proteasome subunit alpha-type 8 isoform X1 [KO:K02731] [EC:3.4.25.1]
118005325  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
118006897  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
118008133  PSME4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
118008418  IFNG; interferon gamma [KO:K04687]
118009551  POMP; proteasome maturation protein [KO:K11599]
118010572  [KO:K02725] [EC:3.4.25.1]
118010624  [KO:K02725] [EC:3.4.25.1]
118011371  PSMF1; proteasome inhibitor PI31 subunit isoform X1 [KO:K06700]
118011954  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
118012403  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
118014030  [KO:K06698]
118014709  [KO:K03064]
118014830  [KO:K03035]
118015397  [KO:K02726] [EC:3.4.25.1]
118015836  PSMC3; 26S proteasome regulatory subunit 6A [KO:K03065]
118016235  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 isoform X1 [KO:K03039]
118017695  PSMB7; proteasome subunit beta type-7 isoform X1 [KO:K02739] [EC:3.4.25.1]
118018221  [KO:K02737] [EC:3.4.25.1]
118018432  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
118019037  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
118019701  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
118020657  PSMC2; 26S proteasome regulatory subunit 7 [KO:K03061]
118020955  [KO:K02725] [EC:3.4.25.1]
118021306  [KO:K02725] [EC:3.4.25.1]
118021393  [KO:K02725] [EC:3.4.25.1]
118022663  PSMC4; 26S proteasome regulatory subunit 6B [KO:K03063]
118022700  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
118022951  [KO:K02725] [EC:3.4.25.1]
118023143  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
118023608  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
118023652  PSMB10; proteasome subunit beta type-10 isoform X1 [KO:K02733] [EC:3.4.25.1]
118024028  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
118024030  ADRM1; proteasomal ubiquitin receptor ADRM1 isoform X1 [KO:K06691]
118024353  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
118024383  PSMC5; 26S proteasome regulatory subunit 8 isoform X1 [KO:K03066]
118024545  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
118024680  [KO:K02730] [EC:3.4.25.1]
118024828  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
118024848  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
118024940  PSME3; proteasome activator complex subunit 3 [KO:K06698]
118025330  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 isoform X1 [KO:K03036]
118025623  [KO:K02725] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
mlx04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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