Oryctolagus cuniculus (rabbit): 100101579 Help Entry 100101579         CDS       T03373                                  Symbol CCR5 Name (RefSeq) C-C chemokine receptor type 5   KO K04180   C-C chemokine receptor type 5 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03250   Viral life cycle - HIV-1 ocu03260   Virion - Human immunodeficiency virus ocu04060   Cytokine-cytokine receptor interaction ocu04061   Viral protein interaction with cytokine and cytokine receptor ocu04062   Chemokine signaling pathway ocu04144   Endocytosis ocu05145   Toxoplasmosis ocu05163   Human cytomegalovirus infection ocu05167   Kaposi sarcoma-associated herpesvirus infection ocu05170   Human immunodeficiency virus 1 infection ocu05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     100101579 (CCR5)    03260 Virion - Human immunodeficiency virus     100101579 (CCR5)  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04060 Cytokine-cytokine receptor interaction     100101579 (CCR5)    04061 Viral protein interaction with cytokine and cytokine receptor     100101579 (CCR5)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100101579 (CCR5)  09150 Organismal Systems   09151 Immune system    04062 Chemokine signaling pathway     100101579 (CCR5)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     100101579 (CCR5)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100101579 (CCR5)    05163 Human cytomegalovirus infection     100101579 (CCR5)    05167 Kaposi sarcoma-associated herpesvirus infection     100101579 (CCR5)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100101579 (CCR5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04030 G protein-coupled receptors [BR:ocu04030]     100101579 (CCR5)    04050 Cytokine receptors [BR:ocu04050]     100101579 (CCR5)    04090 CD molecules [BR:ocu04090]     100101579 (CCR5) G protein-coupled receptors [BR:ocu04030]  Rhodopsin family   Chemokine    CC Chemokine     100101579 (CCR5) Cytokine receptors [BR:ocu04050]  Chemokine receptors   CC Chemokine    100101579 (CCR5) CD molecules [BR:ocu04090]  Proteins   100101579 (CCR5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  7tm_1 7TM_GPCR_Srsx 7TM_GPCR_Srx 7TM_GPCR_Srab Motif Other DBs NCBI-GeneID:  100101579 NCBI-ProteinID:  NP_001164596 Ensembl:  ENSOCUG00000003665 UniProt:  Q1ZY22 LinkDB All DBs Position 9:complement(101515775..101523114) Genome browser AA seq 352 aa AA seqDB search MDYSMSTALYDIDYGMSEPCQKIDVKQVAARLLPPLYSLVFIFGFVGNLLVVLILITCKK LKSMTDIYLLNLAISDLLFLLTLPLWAHYAAAEWDFGGAMCKVFTGMYHMGYFGGIFFII LLTIDRYLAIVHAVFALKARTVTFGVVTSGVTWVAAILVSLPDIIFTRSQKEGFRCSCSP HFPASQYQFWKNFHTIMRNILSLVLPLLVMIVCYSGILKTLLRCRNEKRRHRAVRLIFAI MVVYFLFWAPYNVVLLLNTFQEFFGLNNCSSSNRLDRAMQVTETLGMTHCCINPVVYAFV GEKFRSYLSAFFRKHVAKRLCKHCPLLPRETPEPASSVYTRSTGEQEISVGL NT seq 1059 nt NT seq  +upstreamnt  +downstreamnt atggattattcaatgtccactgccctctacgacatcgattatgggatgtcagagccctgc caaaaaatcgacgtgaagcaggtggcagcccggctcctgcccccactgtattcgctcgtg ttcattttcggcttcgtgggcaacctgctggtcgtcctcatcctgatcacctgcaagaag ctgaagagcatgactgacatctacctgctcaacctggccatctccgacctgctcttcctg ctcaccctcccgctgtgggctcactacgccgccgccgagtgggacttcggaggtgccatg tgcaaggtgttcacggggatgtatcacatgggctatttcggtggaatcttcttcatcatc ctcctgaccatcgacaggtacctggctatcgtccacgccgtgtttgccttaaaagccagg acggtcacctttggggtggtgacaagcggggtcacctgggtggcggccatcttggtgtct ctcccagacatcatctttaccagatctcaaaaagaaggttttcggtgttcgtgcagccct cattttccggccagtcagtatcaattttggaagaatttccacaccatcatgaggaacatc ttgagcctggtcctgccgctgctggtcatgatcgtgtgctactcggggatcctgaaaacc ctgctgcggtgtcggaacgagaagaggaggcacagggccgtgcggctcatcttcgccatc atggtggtttacttcctcttctgggcgccctacaacgtcgtcctcctcctgaacaccttc caggagttcttcggcctgaataactgcagcagctccaacagactggaccgagccatgcag gtgacggagacgctgggcatgacacactgctgcatcaaccccgtggtctacgccttcgtc ggggagaagttccggagctacctctccgcgtttttccggaagcacgtcgccaaacgcctc tgcaaacactgcccgctcctcccgcgggagactccggagccggcgagctcagtgtacacc cgatccaccggggagcaggagatctctgttggcctgtga

Oryctolagus cuniculus (rabbit): 100328622 Help Entry 100328622         CDS       T03373                                  Symbol CXCR1 Name (RefSeq) C-X-C chemokine receptor type 1   KO K04175   C-X-C chemokine receptor type 1 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04060   Cytokine-cytokine receptor interaction ocu04061   Viral protein interaction with cytokine and cytokine receptor ocu04062   Chemokine signaling pathway ocu04072   Phospholipase D signaling pathway ocu04144   Endocytosis Brite KEGG Orthology (KO) [BR:ocu00001]  09130 Environmental Information Processing   09132 Signal transduction    04072 Phospholipase D signaling pathway     100328622 (CXCR1)   09133 Signaling molecules and interaction    04060 Cytokine-cytokine receptor interaction     100328622 (CXCR1)    04061 Viral protein interaction with cytokine and cytokine receptor     100328622 (CXCR1)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100328622 (CXCR1)  09150 Organismal Systems   09151 Immune system    04062 Chemokine signaling pathway     100328622 (CXCR1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04030 G protein-coupled receptors [BR:ocu04030]     100328622 (CXCR1)    04050 Cytokine receptors [BR:ocu04050]     100328622 (CXCR1)    04090 CD molecules [BR:ocu04090]     100328622 (CXCR1) G protein-coupled receptors [BR:ocu04030]  Rhodopsin family   Chemokine    CXC Chemokine     100328622 (CXCR1) Cytokine receptors [BR:ocu04050]  Chemokine receptors   CXC Chemokine    100328622 (CXCR1) CD molecules [BR:ocu04090]  Proteins   100328622 (CXCR1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  7tm_1 TMEM70 Motif Other DBs NCBI-GeneID:  100328622 NCBI-ProteinID:  NP_001164553 Ensembl:  ENSOCUG00000015108 UniProt:  P21109 LinkDB All DBs Position 7:14110843..14114808 Genome browser AA seq 355 aa AA seqDB search MEVNVWNMTDLWTWFEDEFANATGMPPVEKDYSPCLVVTQTLNKYVVVVIYALVFLLSLL GNSLVMLVILYSRSNRSVTDVYLLNLAMADLLFALTMPIWAVSKEKGWIFGTPLCKVVSL VKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFICLGIWALSLILSLPFFLFR QVFSPNNSSPVCYEDLGHNTAKWRMVLRILPHTFGFILPLLVMLFCYGFTLRTLFQAHMG QKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTHVIQETCQRRNDIDRALDATEILGF LHSCLNPIIYAFIGQNFRNGFLKMLAARGLISKEFLTRHRVTSYTSSSTNVPSNL NT seq 1068 nt NT seq  +upstreamnt  +downstreamnt atggaagtaaacgtatggaatatgactgatctgtggacgtggtttgaggatgagtttgca aatgctactggtatgcctcctgtagaaaaagattatagcccctgtctggtagtcacccag acacttaacaaatatgttgtggtcgtcatctatgccctggtcttcctgctgagcctgctg ggcaactccctggtgatgctggtcatactgtacagccggagcaaccgttcggtcaccgac gtctacctgctgaacctggccatggccgacctgctttttgccctgaccatgcctatctgg gccgtctccaaggaaaaaggctggattttcggcacgcccctgtgcaaggtggtctcgctt gtgaaggaagtcaacttctacagtggaatcctgctcctggcctgcatcagtgtggaccgc tacctggccattgtccatgctactcgcacactgacccagaagcgccacttggtcaagttc atatgtctgggcatctgggcgctgtctctgattttgtccctgcccttcttcctcttccgc caagtcttttctccaaacaattccagcccggtctgctatgaggacctgggtcacaacaca gcgaaatggcgcatggtgctgcggatcctgccacacactttcggcttcatcctgccgctg ctggtcatgctgttttgctatgggttcaccctgcgcacgctgttccaggcccacatgggg cagaagcaccgggccatgcgggtcatcttcgccgtcgtgctcatcttccttctctgctgg ctgccctacaacctggtcctgctcgcagacaccctcatgaggacccacgtgatccaggag acgtgtcagcgtcgcaatgacattgaccgggccctggacgccaccgagattctgggcttc ctgcacagctgcctcaaccccatcatctacgccttcattggccaaaactttcgcaatgga ttcctcaagatgcttgcggcccgcggccttattagcaaggagttcctgacacgacatcgg gtcacctcttatacttcttcctctaccaacgtgccttcaaatctctaa

Oryctolagus cuniculus (rabbit): 100328627 Help Entry 100328627         CDS       T03373                                  Symbol CXCR2 Name (RefSeq) C-X-C chemokine receptor type 2   KO K05050   C-X-C chemokine receptor type 2 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu04060   Cytokine-cytokine receptor interaction ocu04061   Viral protein interaction with cytokine and cytokine receptor ocu04062   Chemokine signaling pathway ocu04072   Phospholipase D signaling pathway ocu04144   Endocytosis ocu05163   Human cytomegalovirus infection Brite KEGG Orthology (KO) [BR:ocu00001]  09130 Environmental Information Processing   09132 Signal transduction    04072 Phospholipase D signaling pathway     100328627 (CXCR2)   09133 Signaling molecules and interaction    04060 Cytokine-cytokine receptor interaction     100328627 (CXCR2)    04061 Viral protein interaction with cytokine and cytokine receptor     100328627 (CXCR2)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100328627 (CXCR2)  09150 Organismal Systems   09151 Immune system    04062 Chemokine signaling pathway     100328627 (CXCR2)  09160 Human Diseases   09172 Infectious disease: viral    05163 Human cytomegalovirus infection     100328627 (CXCR2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04030 G protein-coupled receptors [BR:ocu04030]     100328627 (CXCR2)    04050 Cytokine receptors [BR:ocu04050]     100328627 (CXCR2)    04090 CD molecules [BR:ocu04090]     100328627 (CXCR2) G protein-coupled receptors [BR:ocu04030]  Rhodopsin family   Chemokine    CXC Chemokine     100328627 (CXCR2) Cytokine receptors [BR:ocu04050]  Chemokine receptors   CXC Chemokine    100328627 (CXCR2) CD molecules [BR:ocu04090]  Proteins   100328627 (CXCR2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  7tm_1 7TM_GPCR_Srsx TMEM70 Motif Other DBs NCBI-GeneID:  100328627 NCBI-ProteinID:  NP_001164561 UniProt:  P35344 LinkDB All DBs Position 7:complement(14148052..14159138) Genome browser AA seq 358 aa AA seqDB search MQEFTWENYSYEDFFGDFSNYSYSTDLPPTLLDSAPCRSESLETNSYVVLITYILVFLLS LLGNSLVMLVILYSRSTCSVTDVYLLNLAIADLLFATTLPIWAASKVHGWTFGTPLCKVV SLVKEVNFYSGILLLACISVDRYLAIVHATRTMIQKRHLVKFICLSMWGVSLILSLPILL FRNAIFPPNSSPVCYEDMGNSTAKWRMVLRILPQTFGFILPLLVMLFCYVFTLRTLFQAH MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLTDTLMRTHVIQETCERRNDIDRALDATEIL GFLHSCLNPIIYAFIGQKFRYGLLKILAAHGLISKEFLAKESRPSFVASSSGNTSTTL NT seq 1077 nt NT seq  +upstreamnt  +downstreamnt atgcaagagtttacctgggagaattacagctatgaagattttttcggcgatttcagcaat tacagttacagcactgacctaccccctaccctgctagactctgctccgtgccggtcagaa tctctggaaaccaacagctatgttgtgctcatcacctatatcctggtcttcctgctgagc ctgctgggcaactccctggtgatgctggtcatcctgtacagccggagcacctgctcggtc accgacgtctacctgctgaacctggccatcgccgacctgctctttgccaccaccttgccc atctgggccgcctccaaggtgcacggctggactttcggcacgcccctgtgtaaggtggtc tcgcttgtgaaggaagtcaacttctacagcggaatcctgctcctggcctgcatcagtgtg gaccgctacctggccatcgtccatgccacacgcacgatgatccagaagcgccacttggtc aagttcatatgcttaagcatgtggggagtgtctttgatcctgtctctgcccatcttactg ttccgtaatgccatcttcccacccaattccagcccggtctgctatgaggacatggggaac agcactgcgaaatggcgcatggtgctgcggatcctgcctcagactttcggcttcatcctg ccgctgctggtcatgctgttttgctatgtgttcaccctgcgcacgctgttccaggcccac atggggcagaagcaccgggccatgcgggtcatcttcgccgtcgtgctcatcttccttctc tgttggctgccctacaacctggttctgctcacagacaccctcatgaggacccacgtgatc caggagacgtgtgagcgccgcaatgacattgaccgggccctggacgccaccgagattctg ggcttcctgcacagctgcctcaaccccatcatctacgccttcattggccaaaagtttcgc tatggcctgctcaagatcctggcggcccacggcctgatcagcaaggagttcctggccaag gagagcaggccttcctttgtcgcctcgtcttcagggaacacctctaccaccctctaa

Oryctolagus cuniculus (rabbit): 100346189 Help Entry 100346189         CDS       T03373                                  Name (RefSeq) C-X-C chemokine receptor type 4   KO K04189   C-X-C chemokine receptor type 4 Organism ocu  Oryctolagus cuniculus (rabbit) Pathway ocu03250   Viral life cycle - HIV-1 ocu03260   Virion - Human immunodeficiency virus ocu04020   Calcium signaling pathway ocu04060   Cytokine-cytokine receptor interaction ocu04061   Viral protein interaction with cytokine and cytokine receptor ocu04062   Chemokine signaling pathway ocu04144   Endocytosis ocu04360   Axon guidance ocu04670   Leukocyte transendothelial migration ocu04672   Intestinal immune network for IgA production ocu04810   Regulation of actin cytoskeleton ocu05163   Human cytomegalovirus infection ocu05170   Human immunodeficiency virus 1 infection ocu05200   Pathways in cancer Brite KEGG Orthology (KO) [BR:ocu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     100346189    03260 Virion - Human immunodeficiency virus     100346189  09130 Environmental Information Processing   09132 Signal transduction    04020 Calcium signaling pathway     100346189   09133 Signaling molecules and interaction    04060 Cytokine-cytokine receptor interaction     100346189    04061 Viral protein interaction with cytokine and cytokine receptor     100346189  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100346189   09142 Cell motility    04810 Regulation of actin cytoskeleton     100346189  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     100346189    04672 Intestinal immune network for IgA production     100346189    04062 Chemokine signaling pathway     100346189   09158 Development and regeneration    04360 Axon guidance     100346189  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100346189   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100346189    05163 Human cytomegalovirus infection     100346189  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04030 G protein-coupled receptors [BR:ocu04030]     100346189    04050 Cytokine receptors [BR:ocu04050]     100346189    04090 CD molecules [BR:ocu04090]     100346189 G protein-coupled receptors [BR:ocu04030]  Rhodopsin family   Chemokine    CXC Chemokine     100346189 Cytokine receptors [BR:ocu04050]  Chemokine receptors   CXC Chemokine    100346189 CD molecules [BR:ocu04090]  Proteins   100346189 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  7tm_1 CXCR4_N 7TM_GPCR_Srsx COX2_TM Motif Other DBs NCBI-GeneID:  100346189 NCBI-ProteinID:  XP_002712170 LinkDB All DBs Position 7:99801240..99805085 Genome browser AA seq 352 aa AA seqDB search MEGISIYTSDNYTEELGSGDYDSIKEPCFREENAHFNRIFLPTIYSIIFLTGIVGNGLVI LVMGYQKKQRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGKFLCKAVHVIYTVNL YSSVLILAFISLDRYLAIVHATNSQKPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREA EGRYICDRFYPSDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALKT TVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPI LYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS NT seq 1059 nt NT seq  +upstreamnt  +downstreamnt atggaagggatcagtatttacacttcagacaactacacggaggaattgggctcaggggac tatgactccataaaggagccctgcttccgggaggaaaacgcccatttcaaccgcatcttc ctgcccaccatctactccatcatcttcttgactggcatagtgggcaatgggctggtcatc ttggtcatgggttaccagaagaagcagagaagcatgacagacaagtacaggctgcacctg tcggtggccgatctcctgtttgtcatcacgcttcccttctgggcagtggatgctgtggcg aattggtacttcgggaagttcctgtgcaaagctgtccatgtcatctacacagtcaacctc tatagcagtgtcctcatcctggccttcatcagtctggatcggtacctggccatcgtccat gccactaacagtcagaagccaaggaagctattggctgagaaggtggtctacgtcggtgtc tggattcctgctctcctgctgactattcccgatttcatctttgccaatgtcagagaggca gaggggaggtacatctgtgaccgcttctaccccagtgacctgtgggtggttgtgttccag tttcagcacatcatggttggccttatcctgccgggtatcgtcatcctgtcctgctattgc ataatcatctccaagctgtcacactccaagggccaccagaagcgcaaggccctcaagacc actgtcatcctcatcctggccttcttcgcctgctggctgccctactacattgggatcagc atcgactcattcatcctcctggaaatcatcaagcaaggatgtgagtttgagaacactgtg cacaaatggatttctatcaccgaggccctagcctttttccactgttgtctcaatcccatc ttgtatgccttcctcggggccaaatttaaaacctctgctcagcacgcactcacctctgtg agcagagggtccagcctcaagattctctccaaaggaaagcggggtggacattcttctgtt tcaaccgagtctgaatcttcaagttttcactccagctaa

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