KEGG   PATHWAY: agt01100
Entry
agt01100                    Pathway                                
Name
Metabolic pathways - Agrobacterium sp. 33MFTa1.1
Class
Pathway map
agt01100  Metabolic pathways
agt01100

Module
agt_M00002  Glycolysis, core module involving three-carbon compounds [PATH:agt01100]
agt_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:agt01100]
agt_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:agt01100]
agt_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:agt01100]
agt_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:agt01100]
agt_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:agt01100]
agt_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:agt01100]
agt_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:agt01100]
agt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:agt01100]
agt_M00012  Glyoxylate cycle [PATH:agt01100]
agt_M00015  Proline biosynthesis, glutamate => proline [PATH:agt01100]
agt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:agt01100]
agt_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:agt01100]
agt_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:agt01100]
agt_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:agt01100]
agt_M00021  Cysteine biosynthesis, serine => cysteine [PATH:agt01100]
agt_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:agt01100]
agt_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:agt01100]
agt_M00026  Histidine biosynthesis, PRPP => histidine [PATH:agt01100]
agt_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:agt01100]
agt_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:agt01100]
agt_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:agt01100]
agt_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:agt01100]
agt_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:agt01100]
agt_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:agt01100]
agt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:agt01100]
agt_M00082  Fatty acid biosynthesis, initiation [PATH:agt01100]
agt_M00083  Fatty acid biosynthesis, elongation [PATH:agt01100]
agt_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:agt01100]
agt_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:agt01100]
agt_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:agt01100]
agt_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:agt01100]
agt_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:agt01100]
agt_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:agt01100]
agt_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:agt01100]
agt_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:agt01100]
agt_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:agt01100]
agt_M00149  Succinate dehydrogenase, prokaryotes [PATH:agt01100]
agt_M00151  Cytochrome bc1 complex respiratory unit [PATH:agt01100]
agt_M00155  Cytochrome c oxidase, prokaryotes [PATH:agt01100]
agt_M00156  Cytochrome c oxidase, cbb3-type [PATH:agt01100]
agt_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:agt01100]
agt_M00169  CAM (Crassulacean acid metabolism), light [PATH:agt01100]
agt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:agt01100]
agt_M00417  Cytochrome o ubiquinol oxidase [PATH:agt01100]
agt_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:agt01100]
agt_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:agt01100]
agt_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:agt01100]
agt_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:agt01100]
agt_M00555  Betaine biosynthesis, choline => betaine [PATH:agt01100]
agt_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:agt01100]
agt_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:agt01100]
agt_M00621  Glycine cleavage system [PATH:agt01100]
agt_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:agt01100]
agt_M00844  Arginine biosynthesis, ornithine => arginine [PATH:agt01100]
agt_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:agt01100]
agt_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:agt01100]
agt_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:agt01100]
agt_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:agt01100]
agt_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:agt01100]
agt_M00919  Ectoine degradation, ectoine => aspartate [PATH:agt01100]
agt_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:agt01100]
agt_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:agt01100]
agt_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:agt01100]
agt_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:agt01100]
agt_M00970  Proline degradation, proline => glutamate [PATH:agt01100]
agt_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:agt01100]
Organism
Agrobacterium sp. 33MFTa1.1 [GN:agt]
Related
pathway
agt00010  Glycolysis / Gluconeogenesis
agt00020  Citrate cycle (TCA cycle)
agt00030  Pentose phosphate pathway
agt00040  Pentose and glucuronate interconversions
agt00051  Fructose and mannose metabolism
agt00052  Galactose metabolism
agt00053  Ascorbate and aldarate metabolism
agt00061  Fatty acid biosynthesis
agt00071  Fatty acid degradation
agt00130  Ubiquinone and other terpenoid-quinone biosynthesis
agt00190  Oxidative phosphorylation
agt00220  Arginine biosynthesis
agt00230  Purine metabolism
agt00240  Pyrimidine metabolism
agt00250  Alanine, aspartate and glutamate metabolism
agt00260  Glycine, serine and threonine metabolism
agt00261  Monobactam biosynthesis
agt00270  Cysteine and methionine metabolism
agt00280  Valine, leucine and isoleucine degradation
agt00290  Valine, leucine and isoleucine biosynthesis
agt00300  Lysine biosynthesis
agt00310  Lysine degradation
agt00330  Arginine and proline metabolism
agt00332  Carbapenem biosynthesis
agt00340  Histidine metabolism
agt00350  Tyrosine metabolism
agt00360  Phenylalanine metabolism
agt00361  Chlorocyclohexane and chlorobenzene degradation
agt00362  Benzoate degradation
agt00364  Fluorobenzoate degradation
agt00380  Tryptophan metabolism
agt00400  Phenylalanine, tyrosine and tryptophan biosynthesis
agt00401  Novobiocin biosynthesis
agt00410  beta-Alanine metabolism
agt00430  Taurine and hypotaurine metabolism
agt00440  Phosphonate and phosphinate metabolism
agt00450  Selenocompound metabolism
agt00460  Cyanoamino acid metabolism
agt00470  D-Amino acid metabolism
agt00480  Glutathione metabolism
agt00500  Starch and sucrose metabolism
agt00511  Other glycan degradation
agt00520  Amino sugar and nucleotide sugar metabolism
agt00521  Streptomycin biosynthesis
agt00540  Lipopolysaccharide biosynthesis
agt00541  O-Antigen nucleotide sugar biosynthesis
agt00543  Exopolysaccharide biosynthesis
agt00550  Peptidoglycan biosynthesis
agt00552  Teichoic acid biosynthesis
agt00561  Glycerolipid metabolism
agt00562  Inositol phosphate metabolism
agt00564  Glycerophospholipid metabolism
agt00600  Sphingolipid metabolism
agt00620  Pyruvate metabolism
agt00621  Dioxin degradation
agt00622  Xylene degradation
agt00623  Toluene degradation
agt00625  Chloroalkane and chloroalkene degradation
agt00626  Naphthalene degradation
agt00627  Aminobenzoate degradation
agt00630  Glyoxylate and dicarboxylate metabolism
agt00633  Nitrotoluene degradation
agt00640  Propanoate metabolism
agt00643  Styrene degradation
agt00650  Butanoate metabolism
agt00660  C5-Branched dibasic acid metabolism
agt00670  One carbon pool by folate
agt00680  Methane metabolism
agt00730  Thiamine metabolism
agt00740  Riboflavin metabolism
agt00750  Vitamin B6 metabolism
agt00760  Nicotinate and nicotinamide metabolism
agt00770  Pantothenate and CoA biosynthesis
agt00780  Biotin metabolism
agt00785  Lipoic acid metabolism
agt00790  Folate biosynthesis
agt00791  Atrazine degradation
agt00860  Porphyrin metabolism
agt00900  Terpenoid backbone biosynthesis
agt00903  Limonene degradation
agt00906  Carotenoid biosynthesis
agt00907  Pinene, camphor and geraniol degradation
agt00910  Nitrogen metabolism
agt00920  Sulfur metabolism
agt00930  Caprolactam degradation
agt00946  Degradation of flavonoids
agt00999  Biosynthesis of various plant secondary metabolites
agt01040  Biosynthesis of unsaturated fatty acids
agt01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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