KEGG   PATHWAY: agt00010
Entry
agt00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Agrobacterium sp. 33MFTa1.1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
agt00010  Glycolysis / Gluconeogenesis
agt00010

Module
agt_M00002  Glycolysis, core module involving three-carbon compounds [PATH:agt00010]
agt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:agt00010]
Other DBs
GO: 0006096 0006094
Organism
Agrobacterium sp. 33MFTa1.1 [GN:agt]
Gene
EYD00_13160  glucokinase [KO:K00845] [EC:2.7.1.2]
EYD00_00400  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
EYD00_08675  pyrophosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
EYD00_17135  fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
EYD00_06175  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
EYD00_17120  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
EYD00_17130  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
EYD00_09790  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
EYD00_16135  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
EYD00_05230  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
EYD00_17250  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
EYD00_02260  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
EYD00_05240  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
EYD00_05245  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
EYD00_05250  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
EYD00_05260  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EYD00_11240  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
EYD00_06410  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
EYD00_01345  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
EYD00_08270  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
EYD00_05880  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
EYD00_24075  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EYD00_20665  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EYD00_23190  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
EYD00_09185  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
EYD00_11810  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
EYD00_19710  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
EYD00_22815  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
EYD00_11690  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
EYD00_19665  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
EYD00_12435  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
agt00020  Citrate cycle (TCA cycle)
agt00030  Pentose phosphate pathway
agt00500  Starch and sucrose metabolism
agt00620  Pyruvate metabolism
agt00640  Propanoate metabolism
agt00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system