KEGG   PATHWAY: amou03008
Entry
amou03008                   Pathway                                
Name
Ribosome biogenesis in eukaryotes - Anopheles moucheti
Description
Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.
Class
Genetic Information Processing; Translation
Pathway map
amou03008  Ribosome biogenesis in eukaryotes
amou03008

Organism
Anopheles moucheti [GN:amou]
Gene
128299671  casein kinase II subunit beta [KO:K03115]
128300347  casein kinase II subunit alpha [KO:K03097] [EC:2.7.11.1]
128299388  nucleolar protein 6 [KO:K14544]
128302676  ribosomal RNA-processing protein 7 homolog A [KO:K14545]
128296856  WD repeat-containing protein 43 [KO:K14546]
128303198  U3 small nucleolar RNA-associated protein 4 homolog [KO:K14548]
128305746  U3 small nucleolar RNA-associated protein 15 homolog [KO:K14549]
128301147  HEAT repeat-containing protein 1 homolog [KO:K14550]
128300562  uncharacterized protein LOC128300562 [KO:K14552]
128301319  U3 small nucleolar RNA-associated protein 18 homolog [KO:K14553]
128298923  WD repeat-containing protein 36 [KO:K14554]
128302181  transducin beta-like protein 3 [KO:K14555]
128308860  WD repeat-containing protein 3 [KO:K14556]
128303857  U3 small nucleolar RNA-associated protein 6 homolog [KO:K14557]
128297091  periodic tryptophan protein 2 homolog [KO:K14558]
128301205  U3 small nucleolar ribonucleoprotein protein MPP10 [KO:K14559]
128304901  U3 small nucleolar ribonucleoprotein protein IMP3 [KO:K14560]
128299628  U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 [KO:K14561]
128309533  rRNA 2'-O-methyltransferase fibrillarin [KO:K14563] [EC:2.1.1.-]
128309821  nucleolar protein 56 [KO:K14564]
128310310  nucleolar protein 58 isoform X1 [KO:K14565]
128305288  NHP2-like protein 1 homolog [KO:K12845]
128300385  H/ACA ribonucleoprotein complex subunit 4 [KO:K11131] [EC:5.4.99.-]
128309418  H/ACA ribonucleoprotein complex subunit 2-like protein [KO:K11129]
128297485  H/ACA ribonucleoprotein complex subunit 1-like [KO:K11128]
128304672  H/ACA ribonucleoprotein complex subunit 3 [KO:K11130]
128300913  rRNA-processing protein FCF1 homolog [KO:K14566]
128299762  U3 small nucleolar RNA-associated protein 14 homolog A [KO:K14567]
128305945  uncharacterized protein LOC128305945 [KO:K03685] [EC:3.1.26.3]
128298979  ribosomal RNA small subunit methyltransferase NEP1 [KO:K14568] [EC:2.1.1.260]
128305248  ribosome biogenesis protein BMS1 homolog [KO:K14569]
128297260  RNA cytidine acetyltransferase [KO:K14521] [EC:2.3.1.-]
128297750  probable RNA 3'-terminal phosphate cyclase-like protein [KO:K11108]
128303519  ribonucleases P/MRP protein subunit POP1 [KO:K01164] [EC:3.1.26.5]
128300461  ribonuclease P protein subunit p29 [KO:K03538] [EC:3.1.26.5]
128302284  ribonuclease P/MRP protein subunit POP5 isoform X1 [KO:K03537] [EC:3.1.26.5]
128300389  ribonuclease P protein subunit p25-like protein [KO:K14525] [EC:3.1.26.5]
128297792  ribonuclease P protein subunit p20 [KO:K14527] [EC:3.1.26.5]
128304123  ribonuclease P protein subunit p30 isoform X1 [KO:K03539] [EC:3.1.26.5]
128307142  ribonuclease P protein subunit p40-like [KO:K14530] [EC:3.1.26.5]
128301132  uncharacterized protein LOC128301132 [KO:K14570] [EC:3.1.-.-]
128296790  RNA exonuclease 1 homolog [KO:K14570] [EC:3.1.-.-]
128304265  probable oligoribonuclease isoform X1 [KO:K13288] [EC:3.1.-.-]
128301973  5'-3' exoribonuclease 1 [KO:K12618] [EC:3.1.13.-]
128309544  5'-3' exoribonuclease 2 homolog [KO:K12619] [EC:3.1.13.-]
128300379  nucleolar GTP-binding protein 1 [KO:K06943]
128297299  nucleolar GTP-binding protein 2 [KO:K14537]
128302186  guanine nucleotide-binding protein-like 3 homolog [KO:K14538]
128304642  nuclear valosin-containing protein-like isoform X1 [KO:K14571]
128304925  midasin [KO:K14572]
128309321  RNA-binding protein 28 [KO:K14573]
128297629  RNA-binding protein NOB1 [KO:K11883]
128300407  GTP-binding nuclear protein Ran [KO:K07936]
128301328  exportin-1 [KO:K14290]
128300230  60S ribosomal export protein NMD3 [KO:K07562]
128297199  nuclear RNA export factor 1-like [KO:K14284]
128304845  NTF2-related export protein [KO:K14285]
128309608  eukaryotic translation initiation factor 6 [KO:K03264]
128301143  ribosome maturation protein SBDS [KO:K14574]
128296969  elongation factor-like GTPase 1 [KO:K14536] [EC:3.6.5.-]
128296861  large subunit GTPase 1 homolog [KO:K14539] [EC:3.6.1.-]
128302588  ribosome biogenesis protein SPATA5 [KO:K14575]
128303937  adenylate kinase isoenzyme 6 homolog [KO:K18532] [EC:2.7.4.3]
128296852  serine/threonine-protein kinase RIO1 [KO:K07178] [EC:2.7.11.1]
128296917  uncharacterized protein LOC128296917 [KO:K07179] [EC:2.7.11.1]
Reference
  Authors
Freed EF, Bleichert F, Dutca LM, Baserga SJ
  Title
When ribosomes go bad: diseases of ribosome biogenesis.
  Journal
Mol Biosyst 6:481-93 (2010)
DOI:10.1039/b919670f
Reference
  Authors
Perez-Fernandez J, Roman A, De Las Rivas J, Bustelo XR, Dosil M
  Title
The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.
  Journal
Mol Cell Biol 27:5414-29 (2007)
DOI:10.1128/MCB.00380-07
Reference
  Authors
Strunk BS, Karbstein K
  Title
Powering through ribosome assembly.
  Journal
RNA 15:2083-104 (2009)
DOI:10.1261/rna.1792109
Reference
  Authors
Granneman S, Baserga SJ
  Title
Ribosome biogenesis: of knobs and RNA processing.
  Journal
Exp Cell Res 296:43-50 (2004)
DOI:10.1016/j.yexcr.2004.03.016
Reference
  Authors
Kressler D, Hurt E, Bassler J
  Title
Driving ribosome assembly.
  Journal
Biochim Biophys Acta 1803:673-83 (2010)
DOI:10.1016/j.bbamcr.2009.10.009
Related
pathway
amou03010  Ribosome
KO pathway
ko03008   
LinkDB

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