KEGG   PATHWAY: avq01100
Entry
avq01100                    Pathway                                
Name
Metabolic pathways - Agrobacterium vaccinii
Class
Pathway map
avq01100  Metabolic pathways
avq01100

Module
avq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:avq01100]
avq_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:avq01100]
avq_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:avq01100]
avq_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:avq01100]
avq_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:avq01100]
avq_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:avq01100]
avq_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:avq01100]
avq_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:avq01100]
avq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:avq01100]
avq_M00012  Glyoxylate cycle [PATH:avq01100]
avq_M00015  Proline biosynthesis, glutamate => proline [PATH:avq01100]
avq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:avq01100]
avq_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:avq01100]
avq_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:avq01100]
avq_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:avq01100]
avq_M00021  Cysteine biosynthesis, serine => cysteine [PATH:avq01100]
avq_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:avq01100]
avq_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:avq01100]
avq_M00026  Histidine biosynthesis, PRPP => histidine [PATH:avq01100]
avq_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:avq01100]
avq_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:avq01100]
avq_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:avq01100]
avq_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:avq01100]
avq_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:avq01100]
avq_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:avq01100]
avq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:avq01100]
avq_M00082  Fatty acid biosynthesis, initiation [PATH:avq01100]
avq_M00083  Fatty acid biosynthesis, elongation [PATH:avq01100]
avq_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:avq01100]
avq_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:avq01100]
avq_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:avq01100]
avq_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:avq01100]
avq_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:avq01100]
avq_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:avq01100]
avq_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:avq01100]
avq_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:avq01100]
avq_M00149  Succinate dehydrogenase, prokaryotes [PATH:avq01100]
avq_M00151  Cytochrome bc1 complex respiratory unit [PATH:avq01100]
avq_M00155  Cytochrome c oxidase, prokaryotes [PATH:avq01100]
avq_M00156  Cytochrome c oxidase, cbb3-type [PATH:avq01100]
avq_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:avq01100]
avq_M00169  CAM (Crassulacean acid metabolism), light [PATH:avq01100]
avq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:avq01100]
avq_M00417  Cytochrome o ubiquinol oxidase [PATH:avq01100]
avq_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:avq01100]
avq_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:avq01100]
avq_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:avq01100]
avq_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:avq01100]
avq_M00555  Betaine biosynthesis, choline => betaine [PATH:avq01100]
avq_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:avq01100]
avq_M00621  Glycine cleavage system [PATH:avq01100]
avq_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:avq01100]
avq_M00844  Arginine biosynthesis, ornithine => arginine [PATH:avq01100]
avq_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:avq01100]
avq_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:avq01100]
avq_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:avq01100]
avq_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:avq01100]
avq_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:avq01100]
avq_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:avq01100]
avq_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:avq01100]
avq_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:avq01100]
avq_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:avq01100]
avq_M00970  Proline degradation, proline => glutamate [PATH:avq01100]
avq_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:avq01100]
Organism
Agrobacterium vaccinii [GN:avq]
Related
pathway
avq00010  Glycolysis / Gluconeogenesis
avq00020  Citrate cycle (TCA cycle)
avq00030  Pentose phosphate pathway
avq00040  Pentose and glucuronate interconversions
avq00051  Fructose and mannose metabolism
avq00052  Galactose metabolism
avq00053  Ascorbate and aldarate metabolism
avq00061  Fatty acid biosynthesis
avq00071  Fatty acid degradation
avq00074  Mycolic acid biosynthesis
avq00130  Ubiquinone and other terpenoid-quinone biosynthesis
avq00190  Oxidative phosphorylation
avq00220  Arginine biosynthesis
avq00230  Purine metabolism
avq00240  Pyrimidine metabolism
avq00250  Alanine, aspartate and glutamate metabolism
avq00260  Glycine, serine and threonine metabolism
avq00261  Monobactam biosynthesis
avq00270  Cysteine and methionine metabolism
avq00280  Valine, leucine and isoleucine degradation
avq00290  Valine, leucine and isoleucine biosynthesis
avq00300  Lysine biosynthesis
avq00310  Lysine degradation
avq00330  Arginine and proline metabolism
avq00332  Carbapenem biosynthesis
avq00340  Histidine metabolism
avq00350  Tyrosine metabolism
avq00360  Phenylalanine metabolism
avq00361  Chlorocyclohexane and chlorobenzene degradation
avq00362  Benzoate degradation
avq00364  Fluorobenzoate degradation
avq00380  Tryptophan metabolism
avq00400  Phenylalanine, tyrosine and tryptophan biosynthesis
avq00401  Novobiocin biosynthesis
avq00410  beta-Alanine metabolism
avq00430  Taurine and hypotaurine metabolism
avq00440  Phosphonate and phosphinate metabolism
avq00450  Selenocompound metabolism
avq00460  Cyanoamino acid metabolism
avq00470  D-Amino acid metabolism
avq00480  Glutathione metabolism
avq00500  Starch and sucrose metabolism
avq00520  Amino sugar and nucleotide sugar metabolism
avq00521  Streptomycin biosynthesis
avq00540  Lipopolysaccharide biosynthesis
avq00541  O-Antigen nucleotide sugar biosynthesis
avq00543  Exopolysaccharide biosynthesis
avq00550  Peptidoglycan biosynthesis
avq00552  Teichoic acid biosynthesis
avq00561  Glycerolipid metabolism
avq00562  Inositol phosphate metabolism
avq00564  Glycerophospholipid metabolism
avq00600  Sphingolipid metabolism
avq00620  Pyruvate metabolism
avq00622  Xylene degradation
avq00623  Toluene degradation
avq00624  Polycyclic aromatic hydrocarbon degradation
avq00625  Chloroalkane and chloroalkene degradation
avq00626  Naphthalene degradation
avq00627  Aminobenzoate degradation
avq00630  Glyoxylate and dicarboxylate metabolism
avq00633  Nitrotoluene degradation
avq00640  Propanoate metabolism
avq00643  Styrene degradation
avq00650  Butanoate metabolism
avq00660  C5-Branched dibasic acid metabolism
avq00670  One carbon pool by folate
avq00680  Methane metabolism
avq00710  Carbon fixation by Calvin cycle
avq00720  Other carbon fixation pathways
avq00730  Thiamine metabolism
avq00740  Riboflavin metabolism
avq00750  Vitamin B6 metabolism
avq00760  Nicotinate and nicotinamide metabolism
avq00770  Pantothenate and CoA biosynthesis
avq00780  Biotin metabolism
avq00785  Lipoic acid metabolism
avq00790  Folate biosynthesis
avq00791  Atrazine degradation
avq00860  Porphyrin metabolism
avq00900  Terpenoid backbone biosynthesis
avq00906  Carotenoid biosynthesis
avq00907  Pinene, camphor and geraniol degradation
avq00910  Nitrogen metabolism
avq00920  Sulfur metabolism
avq00930  Caprolactam degradation
avq00946  Degradation of flavonoids
avq00999  Biosynthesis of various plant secondary metabolites
avq01040  Biosynthesis of unsaturated fatty acids
avq01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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