KEGG   PATHWAY: avq00010
Entry
avq00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Agrobacterium vaccinii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
avq00010  Glycolysis / Gluconeogenesis
avq00010

Module
avq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:avq00010]
avq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:avq00010]
Other DBs
GO: 0006096 0006094
Organism
Agrobacterium vaccinii [GN:avq]
Gene
HRR99_00360  glucokinase [KO:K00845] [EC:2.7.1.2]
HRR99_01170  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HRR99_10040  pyrophosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
HRR99_22530  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
HRR99_11975  fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
HRR99_20170  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
HRR99_21930  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
HRR99_06590  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
HRR99_11940  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HRR99_11960  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HRR99_00345  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
HRR99_15165  phosphoglycerate mutase family protein [KO:K01834] [EC:5.4.2.11]
HRR99_07625  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
HRR99_12175  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HRR99_02975  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
HRR99_07615  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
HRR99_07610  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
HRR99_07600  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
HRR99_07590  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HRR99_13515  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HRR99_07815  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HRR99_06700  zinc-binding dehydrogenase [KO:K00001] [EC:1.1.1.1]
HRR99_10235  zinc-dependent alcohol dehydrogenase family protein [KO:K00001] [EC:1.1.1.1]
HRR99_08630  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
HRR99_10575  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
HRR99_13865  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HRR99_17315  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
HRR99_13810  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
HRR99_12325  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
HRR99_16350  ROK family protein [KO:K00886] [EC:2.7.1.63]
HRR99_14620  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
avq00020  Citrate cycle (TCA cycle)
avq00030  Pentose phosphate pathway
avq00500  Starch and sucrose metabolism
avq00620  Pyruvate metabolism
avq00640  Propanoate metabolism
avq00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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