KEGG   PATHWAY: cem02010
Entry
cem02010                    Pathway                                
Name
ABC transporters - Cedecea neteri M006
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
cem02010  ABC transporters
cem02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Cedecea neteri M006 [GN:cem]
Gene
LH23_22350  thiosulfate transporter subunit [KO:K02048]
LH23_05710  sulfate transporter subunit [KO:K23163]
LH23_22345  sulfate/thiosulfate transporter subunit [KO:K02046]
LH23_22340  cysW; sulfate/thiosulfate transporter permease subunit [KO:K02047]
LH23_22335  sulfate/thiosulfate transporter subunit [KO:K02045] [EC:7.3.2.3]
LH23_22895  ABC transporter substrate-binding protein [KO:K15495]
LH23_22890  sulfate ABC transporter permease [KO:K15496]
LH23_02350  tauA; taurine ABC transporter substrate-binding protein [KO:K15551]
LH23_02340  taurine transporter subunit [KO:K15552]
LH23_02345  tauB; taurine transporter ATP-binding subunit [KO:K10831] [EC:7.6.2.7]
LH23_12895  alkanesulfonate transporter substrate-binding subunit [KO:K15553]
LH23_12885  ssuC; alkanesulfonate transporter permease subunit [KO:K15554]
LH23_12880  ssuB; aliphatic sulfonates transport ATP-binding subunit [KO:K15555] [EC:7.6.2.14]
LH23_20230  thiamine biosynthesis protein [KO:K15598]
LH23_20225  ABC transporter permease [KO:K15599]
LH23_20220  ABC transporter ATPase [KO:K15600]
LH23_11840  modA; molybdate transporter [KO:K02020]
LH23_06800  molybdenum ABC transporter substrate-binding protein [KO:K02020]
LH23_11845  modB; molybdate ABC transporter permease [KO:K02018]
LH23_11850  modC; molybdate transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
LH23_11820  molybdenum ABC transporter ATP-binding protein [KO:K05776]
LH23_12960  iron ABC transporter substrate-binding protein [KO:K02012]
LH23_13945  ABC transporter substrate-binding protein [KO:K02012]
LH23_12955  spermidine/putrescine ABC transporter permease [KO:K02011]
LH23_13950  ABC transporter permease [KO:K02011]
LH23_12950  lipase [KO:K02010] [EC:7.2.2.7]
LH23_13955  ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
LH23_08835  tbpA; thiamine ABC transporter substrate-binding protein [KO:K02064]
LH23_08830  thiP; thiamine ABC transporter permease [KO:K02063]
LH23_08825  thiQ; thiamine ABC transporter ATP-binding protein [KO:K02062] [EC:7.6.2.15]
LH23_13890  potD; spermidine/putrescine ABC transporter substrate-binding protein [KO:K11069]
LH23_13895  potC; spermidine/putrescine ABC transporter permease [KO:K11070]
LH23_13900  potB; spermidine/putrescine ABC transporter permease [KO:K11071]
LH23_13905  potA; putrescine/spermidine ABC transporter ATPase [KO:K11072] [EC:7.6.2.11]
LH23_12510  spermidine/putrescine ABC transporter substrate-binding protein [KO:K11073]
LH23_12525  spermidine/putrescine ABC transporter permease [KO:K11074]
LH23_12520  spermidine/putrescine ABC transporter permease [KO:K11075]
LH23_12515  potG; putrescine transporter ATP-binding subunit [KO:K11076] [EC:7.6.2.16]
LH23_00750  proX; glycine/betaine ABC transporter substrate-binding protein [KO:K02002]
LH23_00745  glycine/betaine ABC transporter permease [KO:K02001]
LH23_00740  glycine/betaine ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
LH23_12130  osmoprotectant uptake system substrate-binding protein [KO:K05845]
LH23_15820  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
LH23_18830  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
LH23_23035  quaternary ammonium transporter [KO:K05845]
LH23_12135  osmoprotectant uptake system permease [KO:K05846]
LH23_12145  osmoprotectant uptake system permease [KO:K05846]
LH23_15815  choline ABC transporter permease [KO:K05846]
LH23_15825  glycine/betaine ABC transporter permease [KO:K05846]
LH23_18835  ABC transporter permease [KO:K05846]
LH23_23040  ABC transporter permease [KO:K05846]
LH23_23045  quaternary ammonium transporter [KO:K05846]
LH23_18840  ABC transporter permease [KO:K05846]
LH23_12140  ATP-binding protein [KO:K05847] [EC:7.6.2.9]
LH23_15810  glycine/betaine ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
LH23_23050  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
LH23_18845  glycine/betaine ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
LH23_06645  malE; sugar ABC transporter substrate-binding protein [KO:K10108]
LH23_06640  malF; maltose transporter membrane protein [KO:K10109]
LH23_06635  malG; maltose transporter permease [KO:K10110]
LH23_06650  maltose/maltodextrin transporter ATP-binding protein [KO:K10111] [EC:7.5.2.-]
LH23_02920  ABC transporter substrate-binding protein [KO:K07323]
LH23_02925  phospholipid ABC transporter substrate-binding protein [KO:K02067]
LH23_02930  ABC transporter permease [KO:K02066]
LH23_02915  phospholipid ABC transporter substrate-binding protein [KO:K07122]
LH23_02935  ABC transporter ATP-binding protein [KO:K02065]
LH23_17390  sugar ABC transporter substrate-binding protein [KO:K10439]
LH23_13165  ABC transporter substrate-binding protein [KO:K10439]
LH23_06910  transcriptional regulator [KO:K10439]
LH23_05325  D-ribose transporter subunit RbsB [KO:K10439]
LH23_13175  membrane protein [KO:K10440]
LH23_13180  ABC transporter permease [KO:K10440]
LH23_06915  ribose ABC transporter permease [KO:K10440]
LH23_05320  rbsC; ribose ABC transporter permease [KO:K10440]
LH23_17405  ABC transporter permease [KO:K10440]
LH23_17400  ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
LH23_05315  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
LH23_06920  D-ribose transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
LH23_13170  sugar ABC transporter ATPase [KO:K10441] [EC:7.5.2.7]
LH23_05310  D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
LH23_21145  sugar ABC transporter substrate-binding protein [KO:K10540]
LH23_21135  mglC; beta-methylgalactoside transporter permease [KO:K10541]
LH23_21140  sugar ABC transporter ATP-binding protein [KO:K10542] [EC:7.5.2.11]
LH23_05010  xylF; D-xylose transporter subunit XylF [KO:K10543]
LH23_05020  sugar ABC transporter permease [KO:K10544]
LH23_05015  xylose transporter [KO:K10545] [EC:7.5.2.10]
LH23_06950  D-allose transporter subunit [KO:K10549]
LH23_06940  D-allose transporter subunit [KO:K10550]
LH23_06945  D-allose transporter ATP-binding protein [KO:K10551] [EC:7.5.2.8]
LH23_02040  sugar ABC transporter substrate-binding protein [KO:K17208]
LH23_02030  sugar ABC transporter permease [KO:K17209]
LH23_02035  D-ribose transporter ATP-binding protein [KO:K17210]
LH23_16675  ABC transporter substrate-binding protein [KO:K05813]
LH23_04030  glycerol-3-phosphate ABC transporter substrate-binding protein [KO:K05813]
LH23_16655  sugar ABC transporter permease [KO:K05814]
LH23_04025  glycerol-3-phosphate transporter permease [KO:K05814]
LH23_16660  ABC transporter permease [KO:K05815]
LH23_04020  glycerol-3-phosphate transporter membrane protein [KO:K05815]
LH23_16670  ABC transporter [KO:K05816] [EC:7.6.2.10]
LH23_04015  ugpC; glycerol-3-phosphate transporter ATP-binding subunit [KO:K05816] [EC:7.6.2.10]
LH23_05200  phosphate ABC transporter substrate-binding protein [KO:K02040]
LH23_05195  pstC; phosphate transporter permease subunit PstC [KO:K02037]
LH23_05190  pstA; phosphate transporter permease subunit PtsA [KO:K02038]
LH23_05185  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
LH23_02130  phosphonate ABC transporter substrate-binding protein [KO:K02044]
LH23_02135  phosphonate ABC transporter permease [KO:K02042]
LH23_02140  phosphonate ABC transporter permease [KO:K02042]
LH23_02125  phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
LH23_21775  histidine ABC transporter substrate-binding protein HisJ [KO:K10013]
LH23_15315  ABC transporter substrate-binding protein [KO:K10013]
LH23_21760  amino acid ABC transporter permease [KO:K10015]
LH23_21765  amino acid ABC transporter permease [KO:K10016]
LH23_21755  amino acid transporter [KO:K10017] [EC:7.4.2.1]
LH23_21770  histidine ABC transporter substrate-binding protein HisJ [KO:K10014]
LH23_12395  glnH; glutamine ABC transporter substrate-bindnig protein [KO:K10036]
LH23_12390  glnP; glutamine ABC transporter permease [KO:K10037]
LH23_12385  glnQ; glutamine ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
LH23_12540  arginine ABC transporter substrate-binding protein [KO:K09996]
LH23_12555  arginine ABC transporter substrate-binding protein [KO:K09997]
LH23_12545  artM; arginine transporter permease subunit ArtM [KO:K09998]
LH23_12550  arginine transporter permease subunit ArtQ [KO:K09999]
LH23_12560  arginine ABC transporter ATP-binding protein [KO:K10000] [EC:7.4.2.1]
LH23_11445  amino acid transporter [KO:K10001]
LH23_11435  amino acid ABC transporter permease [KO:K10002]
LH23_11440  amino acid ABC transporter permease [KO:K10003]
LH23_11430  artP; arginine transporter ATP-binding subunit [KO:K10004] [EC:7.4.2.1]
LH23_03230  amino acid ABC transporter substrate-binding protein [KO:K09969]
LH23_03235  amino acid ABC transporter permease [KO:K09970]
LH23_03240  amino acid ABC transporter permease [KO:K09971]
LH23_03245  ABC transporter ATP-binding protein [KO:K09972] [EC:7.4.2.1]
LH23_19685  cystine transporter subunit [KO:K02424]
LH23_19675  amino acid ABC transporter permease [KO:K10009]
LH23_19670  amino acid ABC transporter ATP-binding protein [KO:K10010] [EC:7.4.2.1]
LH23_04060  leucine ABC transporter substrate-binding protein [KO:K01999]
LH23_04070  leucine ABC transporter substrate-binding protein [KO:K01999]
LH23_04055  branched-chain amino acid transporter permease subunit LivH [KO:K01997]
LH23_04050  livM; leucine/isoleucine/valine transporter permease subunit [KO:K01998]
LH23_04045  livG; leucine/isoleucine/valine transporter ATP-binding subunit [KO:K01995]
LH23_04040  livF; leucine/isoleucine/valine transporter ATP-binding subunit [KO:K01996]
LH23_15480  methionine ABC transporter substrate-binding protein [KO:K02073]
LH23_09415  metQ; DL-methionine transporter substrate-binding subunit [KO:K02073]
LH23_22620  methionine ABC transporter ATPase [KO:K02073]
LH23_17315  metQ; DL-methionine transporter substrate-binding subunit [KO:K02073]
LH23_22850  metal ABC transporter substrate-binding protein [KO:K02073]
LH23_15485  methionine import system permease MetP [KO:K02072]
LH23_09420  DL-methionine transporter permease subunit [KO:K02072]
LH23_22610  methionine ABC transporter permease [KO:K02072]
LH23_22860  metal ABC transporter permease [KO:K02072]
LH23_15490  methionine ABC transporter ATP-binding protein [KO:K02071]
LH23_09425  metN; DL-methionine transporter ATP-binding subunit [KO:K02071]
LH23_22615  methionine ABC transporter ATP-binding protein [KO:K02071]
LH23_17705  branched-chain amino acid ABC transporter substrate-binding protein [KO:K11959]
LH23_17700  urea ABC transporter permease [KO:K11960]
LH23_17695  amino acid ABC transporter permease [KO:K11961]
LH23_17690  urea ABC transporter ATP-binding protein [KO:K11962]
LH23_11905  branched-chain amino acid ABC transporter ATP-binding protein [KO:K11963]
LH23_17685  urea ABC transporter ATP-binding protein [KO:K11963]
LH23_13045  peptide ABC transporter substrate-binding protein [KO:K15580]
LH23_17940  peptide ABC transporter substrate-binding protein [KO:K15580]
LH23_18415  peptide ABC transporter substrate-binding protein [KO:K15580]
LH23_18410  oppB; oligopeptide transporter permease [KO:K15581]
LH23_18405  peptide ABC transporter permease [KO:K15582]
LH23_18400  oppD; oligopeptide transporter ATP-binding component [KO:K15583]
LH23_18395  peptide ABC transporter ATP-binding protein [KO:K10823]
LH23_17735  peptide ABC transporter substrate-binding protein [KO:K12368]
LH23_15360  peptide ABC transporter substrate-binding protein [KO:K12368]
LH23_04875  peptide ABC transporter substrate-binding protein [KO:K12368]
LH23_04880  peptide transporter [KO:K12369]
LH23_04885  peptide transporter [KO:K12370]
LH23_04890  dppD; peptide ABC transporter ATP-binding protein [KO:K12371]
LH23_04895  dppF; peptide ABC transporter ATP-binding protein [KO:K12372]
LH23_18015  peptide ABC transporter substrate-binding protein [KO:K19226]
LH23_18020  peptide ABC transporter permease [KO:K19227]
LH23_18025  peptide ABC transporter permease [KO:K19228]
LH23_18030  peptide ABC transporter ATP-binding protein [KO:K19229]
LH23_18035  peptide ABC transporter ATP-binding protein [KO:K19230]
LH23_21055  glutathione ABC transporter substrate-binding protein [KO:K13889]
LH23_16770  ABC transporter permease [KO:K13890]
LH23_21050  glutathione ABC transporter permease [KO:K13890]
LH23_21045  glutathione ABC transporter permease [KO:K13891]
LH23_21060  glutathione ABC transporter ATP-binding protein [KO:K13892]
LH23_21315  antibiotic ABC transporter substrate-binding protein [KO:K13893]
LH23_21320  microcin ABC transporter permease [KO:K13894]
LH23_21325  microcin ABC transporter permease [KO:K13895]
LH23_21330  microcin ABC transporter ATP-binding protein [KO:K13896]
LH23_09200  iron-hydroxamate transporter substrate-binding subunit [KO:K23227]
LH23_09855  ABC transporter substrate-binding protein [KO:K23227]
LH23_13455  iron-hydroxamate transporter substrate-binding subunit [KO:K23227]
LH23_09205  iron ABC transporter [KO:K23228]
LH23_09860  fecCD transport family protein [KO:K23228]
LH23_13460  iron ABC transporter [KO:K23228]
LH23_09195  iron-hydroxamate transporter ATP-binding subunit [KO:K10829] [EC:7.2.2.16]
LH23_09230  vitamin B12-transporter protein BtuF [KO:K06858]
LH23_14665  Vitamin B12 import system permease BtuC [KO:K06073]
LH23_14675  vitamin B12-transporter ATPase [KO:K06074] [EC:7.6.2.8]
LH23_19330  znuA; zinc ABC transporter substrate-binding protein [KO:K09815]
LH23_19340  znuB; high-affinity zinc transporter membrane component [KO:K09816]
LH23_19335  znuC; zinc ABC transporter ATPase [KO:K09817] [EC:7.2.2.20]
LH23_07115  iron ABC transporter substrate-binding protein [KO:K11604]
LH23_07105  membrane protein [KO:K11605]
LH23_07100  membrane protein [KO:K11606]
LH23_07110  manganese/iron transporter ATP-binding protein [KO:K11607]
LH23_08045  autoinducer 2-binding protein lsrB [KO:K10555]
LH23_08035  ABC transporter permease [KO:K10556]
LH23_08040  autoinducer 2 import system permease LsrD [KO:K10557]
LH23_08030  ABC transporter ATP-binding protein [KO:K10558]
LH23_13865  outer membrane-specific lipoprotein transporter subunit LolC [KO:K09808]
LH23_13875  outer membrane-specific lipoprotein transporter subunit LolE [KO:K09808]
LH23_13870  lolD; lipoprotein ABC transporter ATP-binding protein [KO:K09810] [EC:7.6.2.-]
LH23_21955  cytochrome C biogenesis protein CcmD [KO:K02196]
LH23_21960  heme ABC transporter permease [KO:K02195]
LH23_21965  heme ABC transporter permease [KO:K02194]
LH23_21970  cytochrome C biogenesis protein CcmA [KO:K02193] [EC:7.6.2.5]
LH23_02550  lipopolysaccharide ABC transporter permease [KO:K07091]
LH23_02545  lipopolysaccharide ABC transporter permease [KO:K11720]
LH23_02965  sugar ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
LH23_04095  ftsX; cell division protein FtsX [KO:K09811]
LH23_04100  cell division protein FtsE [KO:K09812]
LH23_12780  lipid transporter ATP-binding/permease [KO:K11085] [EC:7.5.2.6]
LH23_10355  multidrug ABC transporter ATP-binding protein [KO:K18889]
LH23_10360  multidrug ABC transporter ATP-binding protein [KO:K18890]
LH23_08190  peptidase C39 [KO:K13409]
LH23_00520  hypothetical protein [KO:K13409]
LH23_16425  ATP-binding protein [KO:K12541]
LH23_00480  ATP-binding protein [KO:K12541]
LH23_12670  amino acid ABC transporter permease [KO:K16012]
LH23_12675  amino acid ABC transporter permease [KO:K16013]
LH23_16905  macrolide transporter [KO:K05685] [EC:7.6.2.-]
LH23_12640  macrolide transporter [KO:K05685] [EC:7.6.2.-]
LH23_21395  multidrug transporter membrane component/ATP-binding component [KO:K06159]
LH23_09865  cyclic peptide transporter [KO:K06160]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
PMID:18424520
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
PMID:18375759
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