KEGG   PATHWAY: cfar03440
Entry
cfar03440                   Pathway                                
Name
Homologous recombination - Citrobacter farmeri
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
cfar03440  Homologous recombination
cfar03440

Other DBs
GO: 0000724
Organism
Citrobacter farmeri [GN:cfar]
Gene
CI104_21005  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
CI104_23310  single-stranded DNA-binding protein [KO:K03111]
CI104_28175  single-stranded DNA-binding protein [KO:K03111]
CI104_00015  DNA replication and repair protein RecF [KO:K03629]
CI104_18805  DNA repair protein RecO [KO:K03584]
CI104_06630  recombination protein RecR [KO:K06187]
CI104_19700  recA; DNA recombination/repair protein RecA [KO:K03553]
CI104_24570  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
CI104_15365  Holliday junction branch migration protein RuvA [KO:K03550]
CI104_15360  Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
CI104_15370  crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
CI104_00445  DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
CI104_20315  exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
CI104_20325  recC; exonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
CI104_20310  recD; exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
CI104_05370  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CI104_00010  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CI104_06620  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
CI104_07560  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CI104_10565  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
CI104_05530  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CI104_15270  DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
CI104_27880  DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
CI104_28120  DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
CI104_21990  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
CI104_21230  DNA polymerase III subunit psi [KO:K02344] [EC:2.7.7.7]
CI104_24090  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
CI104_22420  priB; primosomal replication protein N [KO:K02686]
CI104_06605  primosomal replication protein N'' [KO:K04067]
CI104_21315  primosomal protein DnaT [KO:K02317]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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