KEGG   PATHWAY: cfd03440
Entry
cfd03440                    Pathway                                
Name
Homologous recombination - Citrobacter freundii
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
cfd03440  Homologous recombination
cfd03440

Other DBs
GO: 0000724
Organism
Citrobacter freundii [GN:cfd]
Gene
CFNIH1_01445  ssDNA exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
CFNIH1_06015  single-stranded DNA-binding protein [KO:K03111]
CFNIH1_07955  single-stranded DNA-binding protein [KO:K03111]
CFNIH1_25505  single-stranded DNA-binding protein [KO:K03111]
CFNIH1_06600  recF; recombination protein F [KO:K03629]
CFNIH1_24230  recO; DNA repair protein RecO [KO:K03584]
CFNIH1_12520  recR; recombination protein RecR [KO:K06187]
CFNIH1_00500  recA; recombinase A [KO:K03553]
CFNIH1_06875  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
CFNIH1_20465  ruvA; ATP-dependent DNA helicase RuvA [KO:K03550]
CFNIH1_20460  ATP-dependent DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
CFNIH1_20470  ruvC; Holliday junction resolvase [KO:K01159] [EC:3.1.21.10]
CFNIH1_05915  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
CFNIH1_01060  recB; exonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
CFNIH1_01070  recC; exonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
CFNIH1_01055  recD; exonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
CFNIH1_10600  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CFNIH1_06605  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CFNIH1_12510  DNA polymerase III subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
CFNIH1_13365  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CFNIH1_15500  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
CFNIH1_10755  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CFNIH1_26175  exonuclease [KO:K02342] [EC:2.7.7.7]
CFNIH1_20365  DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
CFNIH1_09070  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
CFNIH1_09570  DNA polymerase III subunit psi [KO:K02344] [EC:2.7.7.7]
CFNIH1_07290  primosome assembly protein PriA [KO:K04066] [EC:5.6.2.4]
CFNIH1_08645  primosomal replication protein N [KO:K02686]
CFNIH1_12495  primosomal replication protein N'' [KO:K04067]
CFNIH1_09500  primosomal protein DnaI [KO:K02317]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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