KEGG   PATHWAY: cmj03440
Entry
cmj03440                    Pathway                                
Name
Homologous recombination - Cronobacter malonaticus LMG 23826
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
cmj03440  Homologous recombination
cmj03440

Other DBs
GO: 0000724
Organism
Cronobacter malonaticus LMG 23826 [GN:cmj]
Gene
AFK66_003395  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
AFK66_002190  single-stranded DNA-binding protein [KO:K03111]
AFK66_021950  single-stranded DNA-binding protein [KO:K03111]
AFK66_019730  recF; DNA replication/repair protein RecF [KO:K03629]
AFK66_004440  recO; DNA repair protein RecO [KO:K03584]
AFK66_014390  recR; recombination protein RecR [KO:K06187]
AFK66_003955  recA; DNA recombination/repair protein RecA [KO:K03553]
AFK66_000130  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
AFK66_007640  ruvA; Holliday junction ATP-dependent DNA helicase RuvA [KO:K03550]
AFK66_007645  ATP-dependent DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
AFK66_007635  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
AFK66_000295  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
AFK66_003615  recB; exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
AFK66_003605  recC; exonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
AFK66_003620  recD; exonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
AFK66_015655  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
AFK66_019735  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
AFK66_014425  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
AFK66_013880  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
AFK66_011975  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
AFK66_015495  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
AFK66_007730  DNA polymerase III subunit theta [KO:K02345] [EC:2.7.7.7]
AFK66_017145  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
AFK66_016750  DNA polymerase III subunit psi [KO:K02344] [EC:2.7.7.7]
AFK66_019090  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
AFK66_002555  primosomal replication protein N [KO:K02686]
AFK66_014440  primosomal protein [KO:K04067]
AFK66_016830  primosomal protein DnaI [KO:K02317]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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