KEGG   PATHWAY: cmy00512
Entry
cmy00512                    Pathway                                
Name
Mucin type O-glycan biosynthesis - Chelonia mydas (green sea turtle)
Description
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
cmy00512  Mucin type O-glycan biosynthesis
cmy00512

Other DBs
GO: 0006493
Organism
Chelonia mydas (green sea turtle) [GN:cmy]
Gene
102943232  polypeptide N-acetylgalactosaminyltransferase 6 [KO:K00710] [EC:2.4.1.41]
102945008  GALNT2; polypeptide N-acetylgalactosaminyltransferase 2 isoform X1 [KO:K00710] [EC:2.4.1.41]
102945924  GALNT15; polypeptide N-acetylgalactosaminyltransferase 15 [KO:K00710] [EC:2.4.1.41]
102933818  GALNTL6; polypeptide N-acetylgalactosaminyltransferase-like 6 [KO:K00710] [EC:2.4.1.41]
102942545  GALNT7; N-acetylgalactosaminyltransferase 7 isoform X1 [KO:K00710] [EC:2.4.1.41]
102929376  GALNT17; polypeptide N-acetylgalactosaminyltransferase 17 isoform X1 [KO:K00710] [EC:2.4.1.41]
102931424  GALNT14; polypeptide N-acetylgalactosaminyltransferase 14 isoform X1 [KO:K00710] [EC:2.4.1.41]
102930323  GALNT9; polypeptide N-acetylgalactosaminyltransferase 9 isoform X1 [KO:K00710] [EC:2.4.1.41]
102931732  GALNT16; polypeptide N-acetylgalactosaminyltransferase 16 [KO:K00710] [EC:2.4.1.41]
102939846  GALNT3; polypeptide N-acetylgalactosaminyltransferase 3 isoform X1 [KO:K00710] [EC:2.4.1.41]
102929537  GALNT10; polypeptide N-acetylgalactosaminyltransferase 10 isoform X1 [KO:K00710] [EC:2.4.1.41]
102938088  GALNT8; probable polypeptide N-acetylgalactosaminyltransferase 8 [KO:K00710] [EC:2.4.1.41]
102930261  GALNT5; polypeptide N-acetylgalactosaminyltransferase 5 [KO:K00710] [EC:2.4.1.41]
102931292  GALNT13; polypeptide N-acetylgalactosaminyltransferase 13 [KO:K00710] [EC:2.4.1.41]
102945946  GALNT12; polypeptide N-acetylgalactosaminyltransferase 12 [KO:K00710] [EC:2.4.1.41]
102932871  GALNT18; polypeptide N-acetylgalactosaminyltransferase 18 isoform X2 [KO:K00710] [EC:2.4.1.41]
102937411  polypeptide N-acetylgalactosaminyltransferase 4 [KO:K00710] [EC:2.4.1.41]
102929459  GALNT11; polypeptide N-acetylgalactosaminyltransferase 11 isoform X1 [KO:K00710] [EC:2.4.1.41]
102944604  GALNT1; polypeptide N-acetylgalactosaminyltransferase 1 isoform X1 [KO:K00710] [EC:2.4.1.41]
102947920  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B [KO:K00731] [EC:2.4.1.122]
102946633  C1GALT1; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1 [KO:K00731] [EC:2.4.1.122]
102941510  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B isoform X1 [KO:K00731] [EC:2.4.1.122]
102939289  C1GALT1C1; C1GALT1-specific chaperone 1 [KO:K09653]
102941735  GCNT1; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [KO:K00727] [EC:2.4.1.102]
102946674  GCNT3; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 [KO:K09662] [EC:2.4.1.-]
102947538  GCNT4; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 [KO:K09663] [EC:2.4.1.-]
102942769  ST3GAL1; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1 [KO:K00780] [EC:2.4.3.2 2.4.3.4]
102941283  ST3GAL2; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
102934815  ST6GALNAC1; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 isoform X1 [KO:K03479] [EC:2.4.3.3]
102939328  ST6GALNAC2; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [KO:K06616] [EC:2.4.3.3]
102945850  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 isoform X1 [KO:K06616] [EC:2.4.3.3]
102940238  ST6GALNAC3; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1 [KO:K03373] [EC:2.4.3.7]
102932867  ST6GALNAC4; alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase isoform X1 [KO:K03374] [EC:2.4.3.7]
102944348  B3GNT3; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
102946090  B4GALT5; beta-1,4-galactosyltransferase 5 isoform X1 [KO:K09905] [EC:2.4.1.274 2.4.1.-]
Compound
C02189  [Protein]-L-serine
G00023  Tn antigen
G00024  Thomsen-Friedenreich antigen
G00025   
G00026  Sialyl T antigen
G00027   
G00028   
G00029   
G00030   
G00031   
G00032   
G00033   
G00034   
G00035  Sialyl-Tn antigen
G10611  UDP-N-acetyl-D-galactosamine
G10794   
G13153   
Reference
  Authors
Brockhausen I.
  Title
Pathways of O-glycan biosynthesis in cancer cells.
  Journal
Biochim Biophys Acta 1473:67-95 (1999)
DOI:10.1016/S0304-4165(99)00170-1
Reference
  Authors
Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H.
  Title
Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.
  Journal
J Biol Chem 277:12802-9 (2002)
DOI:10.1074/jbc.M112457200
Reference
  Authors
Korekane H, Taguchi T, Sakamoto Y, Honke K, Dohmae N, Salminen H, Toivonen S, Helin J, Takio K, Renkonen O, Taniguchi N.
  Title
Purification and cDNA cloning of UDP-GlcNAc:GlcNAcbeta1-3Galbeta1-4Glc(NAc)-R [GlcNAc to Gal]beta1,6N-acetylglucosaminyltransferase from rat small intestine: a major carrier of dIGnT activity in rat small intestine.
  Journal
Glycobiology 13:387-400 (2003)
DOI:10.1093/glycob/cwg044
Reference
  Authors
van Die I, van Tetering A, Schiphorst WE, Sato T, Furukawa K, van den Eijnden DH.
  Title
The acceptor substrate specificity of human beta4-galactosyltransferase V indicates its potential function in O-glycosylation.
  Journal
FEBS Lett 450:52-6 (1999)
DOI:10.1016/S0014-5793(99)00462-7
Reference
  Authors
Marcos NT, Pinho S, Grandela C, Cruz A, Samyn-Petit B, Harduin-Lepers A, Almeida R, Silva F, Morais V, Costa J, Kihlberg J, Clausen H, Reis CA
  Title
Role of the human ST6GalNAc-I and ST6GalNAc-II in the synthesis of the cancer-associated sialyl-Tn antigen.
  Journal
Cancer Res 64:7050-7 (2004)
DOI:10.1158/0008-5472.CAN-04-1921
Reference
  Authors
Lee YC, Kaufmann M, Kitazume-Kawaguchi S, Kono M, Takashima S, Kurosawa N, Liu H, Pircher H, Tsuji S
  Title
Molecular cloning and functional expression of two members of mouse NeuAcalpha2,3Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc  III and IV.
  Journal
J Biol Chem 274:11958-67 (1999)
DOI:10.1074/jbc.274.17.11958
Reference
  Authors
Kudelka MR, Ju T, Heimburg-Molinaro J, Cummings RD
  Title
Simple sugars to complex disease--mucin-type O-glycans in cancer.
  Journal
Adv Cancer Res 126:53-135 (2015)
DOI:10.1016/bs.acr.2014.11.002
Reference
  Authors
Yeh JC, Hiraoka N, Petryniak B, Nakayama J, Ellies LG, Rabuka D, Hindsgaul O, Marth JD, Lowe JB, Fukuda M
  Title
Novel sulfated lymphocyte homing receptors and their control by a Core1 extension beta 1,3-N-acetylglucosaminyltransferase.
  Journal
Cell 105:957-69 (2001)
DOI:10.1016/S0092-8674(01)00394-4
Related
pathway
cmy00533  Glycosaminoglycan biosynthesis - keratan sulfate
KO pathway
ko00512   
LinkDB

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