KEGG   PATHWAY: crd03430
Entry
crd03430                    Pathway                                
Name
Mismatch repair - Corynebacterium resistens
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
crd03430  Mismatch repair
crd03430

Other DBs
GO: 0006298
Organism
Corynebacterium resistens [GN:crd]
Gene
CRES_1698  ATP-dependent DNA helicase [KO:K03657] [EC:5.6.2.4]
CRES_1700  ATP-dependent DNA helicase [KO:K03657] [EC:5.6.2.4]
CRES_1686  pcrA; ATP-dependent DNA helicase [KO:K03657] [EC:5.6.2.4]
CRES_1586  xseA; exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
CRES_1587  xseB; exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
CRES_2134  ssb1; Single-stranded DNA-binding protein [KO:K03111]
CRES_0815  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CRES_0002  dnaN; DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
CRES_2065  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
CRES_0653  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CRES_2006  holB; DNA polymerase III subunit delta [KO:K02341] [EC:2.7.7.7]
CRES_0765  hypothetical protein [KO:K02342] [EC:2.7.7.7]
CRES_1360  dnaQ2; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CRES_1390  hypothetical protein [KO:K02342] [EC:2.7.7.7]
CRES_2059  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CRES_0823  hypothetical protein [KO:K02342] [EC:2.7.7.7]
CRES_1395  ligA; DNA ligase [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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