Entry
Name
ABC transporters - Escherichia coli O18:K1:H7 UTI89 (UPEC)
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Escherichia coli O18:K1:H7 UTI89 (UPEC) [GN:
eci ]
Gene
UTI89_C1008 ycbO; putative aliphatic sulfonates binding protein precursor [KO:K15553 ]
UTI89_C1006 ycbM; putative aliphatic sulfonates transport permease protein ssuC [KO:K15554 ]
UTI89_C1251 potD; spermidine/putrescine-binding periplasmic protein precursor [KO:K11069 ]
UTI89_C3039 proX; high-affinity glycine betaine - proline transport system protein [KO:K02002 ]
UTI89_C3038 proW; high-affinity transport system for glycine betaine and proline [KO:K02001 ]
UTI89_C4605 malK; maltose/maltodextrin transport ATP-binding protein malK [KO:K10111 ] [EC:7.5.2.-]
UTI89_C1589 ycjV; hypothetical ABC transporter ATP-binding protein ycjV [KO:K10112 ] [EC:7.5.2.-]
UTI89_C2867 yphF; ABC transporter Periplasmic binding protein YphF precursor [KO:K23545 ]
UTI89_C3960 ugpB; Glycerol-3-phosphate-binding periplasmic protein precursor [KO:K05813 ]
UTI89_C3959 ugpA; SN-glycerol-3-phosphate transport system permease protein ugpA [KO:K05814 ]
UTI89_C3958 ugpE; SN-glycerol-3-phosphate transport system permease protein ugpE [KO:K05815 ]
UTI89_C4279 pstC; cytoplasmic membrane component of high-affinity phosphate-specific ABC transport system [KO:K02037 ]
UTI89_C4278 pstA; phosphate-specific ABC transport system permease protein pstA [KO:K02038 ]
UTI89_C4277 pstB; ATP-binding component of high-affinity phosphate-specific ABC transport system [KO:K02036 ] [EC:7.3.2.1 ]
UTI89_C2594 argT; Lysine-arginine-ornithine-binding periplasmic protein precursor [KO:K10013 ]
UTI89_C2593 hisJ; histidine-binding periplasmic protein of high-affinity histidine transport system [KO:K10014 ]
UTI89_C0651 ybeJ; glutamate/aspartate periplasmic binding protein precursor [KO:K10001 ]
UTI89_C3710 yhdW; putative periplasmic amino-acid ABC transporter binding protein [KO:K09969 ]
UTI89_C3711 yhdX; hypothetical amino-acid ABC transporter permease protein yhdX [KO:K09970 ]
UTI89_C3964 livH; high-affinity branched-chain amino acid transport system permease protein livH [KO:K01997 ]
UTI89_C3963 livM; high-affinity branched-chain amino acid transport system permease protein livM [KO:K01998 ]
UTI89_C3962 livG; ATP-binding component of high-affinity branched-chain amino acid transport system [KO:K01995 ]
UTI89_C1568 sapD; putative ATP-binding protein of peptide transport system [KO:K19229 ]
UTI89_C0832 hypothetical ABC transporter ATP-binding protein in bcr 5'region [KO:K13892 ]
UTI89_C0594 fepB; ferrienterobactin-binding periplasmic protein precursor [KO:K23185 ]
UTI89_C0592 fepD; ferric enterobactin transport system permease protein fepD [KO:K23186 ]
UTI89_C0591 fepG; ferric enterobactin transport system permease protein fepG [KO:K23187 ]
UTI89_C1339 sitA; putative iron transport protein, periplasmic-binding protein SitA [KO:K11604 ]
UTI89_C3314 putative ATP-binding protein of ABC transport system [KO:K16786 ] [EC:7.-.-.-]
UTI89_C3315 putative ATP-binding protein of ABC transport system [KO:K16787 ] [EC:7.-.-.-]
UTI89_C1244 ycfU; lipoprotein releasing system transmembrane protein lolC [KO:K09808 ]
UTI89_C1246 lolE; lipoprotein releasing system transmembrane protein lolE [KO:K09808 ]
UTI89_C1245 lolD; lipoprotein releasing system ATP-binding protein lolD [KO:K09810 ] [EC:7.6.2.-]
UTI89_C0884 ybjZ; macrolide-specific ABC-type efflux carrier [KO:K05685 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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