Entry
Name
ABC transporters - Labrenzia sp. THAF35
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Labrenzia sp. THAF35 [GN:
labt ]
Gene
FIU93_10585 ssuC2; Putative aliphatic sulfonates transport permease protein SsuC [KO:K15599 ]
FIU93_08800 potD2; Spermidine/putrescine-binding periplasmic protein precursor [KO:K02012 ]
FIU93_08805 pgtC1; Phosphoglycerate transport regulatory protein PgtC precursor [KO:K02012 ]
FIU93_13265 pgtC4; Phosphoglycerate transport regulatory protein PgtC precursor [KO:K02012 ]
FIU93_12445 pgtC2; Phosphoglycerate transport regulatory protein PgtC precursor [KO:K02012 ]
FIU93_10845 phnV; Putative 2-aminoethylphosphonate transport system permease protein PhnV [KO:K02011 ]
FIU93_01550 phnU1; Putative 2-aminoethylphosphonate transport system permease protein PhnU [KO:K02011 ]
FIU93_12440 phnU3; Putative 2-aminoethylphosphonate transport system permease protein PhnU [KO:K02011 ]
FIU93_00175 spermidine/putrescine ABC transporter periplasmic substrate-binding protein [KO:K11069 ]
FIU93_05055 potD1; Spermidine/putrescine-binding periplasmic protein precursor [KO:K11069 ]
FIU93_25350 potD3; Spermidine/putrescine-binding periplasmic protein precursor [KO:K11069 ]
FIU93_00185 potB1; Spermidine/putrescine transport system permease protein PotB [KO:K11071 ]
FIU93_05045 potB3; Spermidine/putrescine transport system permease protein PotB [KO:K11071 ]
FIU93_09230 potB4; Spermidine/putrescine transport system permease protein PotB [KO:K11071 ]
FIU93_10895 gbuB; Glycine betaine/carnitine transport permease protein GbuB [KO:K02001 ]
FIU93_01745 opuAB; Glycine betaine transport system permease protein OpuAB [KO:K02001 ]
FIU93_11295 malK5; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
FIU93_11800 malK7; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
FIU93_21500 malK9; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
FIU93_25110 malK11; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
FIU93_11140 ugpC4; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10111 ] [EC:7.5.2.-]
FIU93_29575 malK13; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
FIU93_30065 ugpC7; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
FIU93_08860 malK3; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
FIU93_11925 sugC3; Trehalose import ATP-binding protein SugC [KO:K10112 ] [EC:7.5.2.-]
FIU93_11930 malK8; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
FIU93_30300 ugpC8; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
FIU93_30425 sugC5; Trehalose import ATP-binding protein SugC [KO:K10112 ] [EC:7.5.2.-]
FIU93_28990 sugC4; Trehalose import ATP-binding protein SugC [KO:K10112 ] [EC:7.5.2.-]
FIU93_04815 malK2; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
FIU93_04865 sugC1; Trehalose import ATP-binding protein SugC [KO:K10112 ] [EC:7.5.2.-]
FIU93_25165 malK12; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
FIU93_26840 chvE; Multiple sugar-binding periplasmic receptor ChvE precursor [KO:K10546 ]
FIU93_15655 mlaE; putative phospholipid ABC transporter permease protein MlaE [KO:K02066 ]
FIU93_20370 Branched-chain amino acid transport system / permease component [KO:K23535 ]
FIU93_02320 Branched-chain amino acid transport system / permease component [KO:K23535 ]
FIU93_13025 Branched-chain amino acid transport system / permease component [KO:K23536 ]
FIU93_20365 Branched-chain amino acid transport system / permease component [KO:K23536 ]
FIU93_02315 Branched-chain amino acid transport system / permease component [KO:K23536 ]
FIU93_02325 mglA; Galactose/methyl galactoside import ATP-binding protein MglA [KO:K23537 ]
FIU93_14460 yphF; ABC transporter periplasmic-binding protein YphF precursor [KO:K10439 ]
FIU93_29155 ytfQ2; ABC transporter periplasmic-binding protein YtfQ precursor [KO:K10439 ]
FIU93_26785 ytfQ1; ABC transporter periplasmic-binding protein YtfQ precursor [KO:K23508 ]
FIU93_03065 ugpC2; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K17240 ]
FIU93_11350 ugpC5; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K17325 ]
FIU93_11000 ugpB2; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor [KO:K05813 ]
FIU93_02795 ugpB1; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor [KO:K05813 ]
FIU93_29675 ugpB4; sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor [KO:K05813 ]
FIU93_02790 ugpA1; sn-glycerol-3-phosphate transport system permease protein UgpA [KO:K05814 ]
FIU93_29680 ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA [KO:K05814 ]
FIU93_02235 ABC transporter, phosphonate, periplasmic substrate-binding protein [KO:K02044 ]
FIU93_21650 aapJ; General L-amino acid-binding periplasmic protein AapJ precursor [KO:K09969 ]
FIU93_21645 glnM; putative glutamine ABC transporter permease protein GlnM [KO:K09970 ]
FIU93_21640 yhdY; Inner membrane amino-acid ABC transporter permease protein YhdY [KO:K09971 ]
FIU93_16910 putative amino-acid ABC transporter-binding protein precursor [KO:K02424 ]
FIU93_16915 yecS3; Inner membrane amino-acid ABC transporter permease protein YecS [KO:K10009 ]
FIU93_09445 yecS1; Inner membrane amino-acid ABC transporter permease protein YecS [KO:K23062 ]
FIU93_17550 braC4; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIU93_11145 braC2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIU93_25455 braC6; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIU93_01800 braC1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIU93_11330 braC3; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIU93_23350 braC5; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIU93_27335 braC7; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIU93_25220 livH9; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_25440 livH11; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_10025 livH5; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_11160 livH6; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_01810 livH1; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_04435 livH2; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_18255 livH7; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_09615 livH4; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_27330 livH13; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_21970 livH8; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIU93_09610 livH3; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01998 ]
FIU93_25435 livH10; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01998 ]
FIU93_25450 lptB2; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
FIU93_01820 lptB1; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
FIU93_27320 lptB5; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
FIU93_09625 livF4; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01995 ]
FIU93_01815 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_09620 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_27315 livF12; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_10040 livF5; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_25205 livF9; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_11155 livF6; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_25445 livF10; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_04420 livF2; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_21955 livF8; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIU93_29805 livH15; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K11960 ]
FIU93_27685 livH14; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K11960 ]
FIU93_26955 livH12; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K11960 ]
FIU93_29815 lptB7; Lipopolysaccharide export system ATP-binding protein LptB [KO:K11962 ]
FIU93_27695 lptB6; Lipopolysaccharide export system ATP-binding protein LptB [KO:K11962 ]
FIU93_26965 lptB3; Lipopolysaccharide export system ATP-binding protein LptB [KO:K11962 ]
FIU93_29820 livF14; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K11963 ]
FIU93_27700 livF13; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K11963 ]
FIU93_26970 livF11; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K11963 ]
FIU93_03680 Bacterial extracellular solute-binding protein, family 5 Middle [KO:K13893 ]
FIU93_20750 znuA; High-affinity zinc uptake system protein ZnuA precursor [KO:K09815 ]
FIU93_05120 bioN; Energy-coupling factor transporter transmembrane protein BioN [KO:K16783 ]
FIU93_19425 lolE2; Lipoprotein-releasing system transmembrane protein LolE [KO:K09808 ]
FIU93_01000 lolE1; Lipoprotein-releasing system transmembrane protein LolE [KO:K09808 ]
FIU93_19430 lolD2; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
FIU93_01005 lolD1; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
FIU93_10915 hlyB1; Alpha-hemolysin translocation ATP-binding protein HlyB [KO:K12541 ]
FIU93_20680 hlyB2; Alpha-hemolysin translocation ATP-binding protein HlyB [KO:K12541 ]
FIU93_27000 hlyB3; Alpha-hemolysin translocation ATP-binding protein HlyB [KO:K12541 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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