KEGG   PATHWAY: lma04141
Entry
lma04141                    Pathway                                
Name
Protein processing in endoplasmic reticulum - Leishmania major
Description
The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
lma04141  Protein processing in endoplasmic reticulum
lma04141

Other DBs
GO: 0030433 0034976
Organism
Leishmania major [GN:lma]
Gene
LMJF_11_1050  putative pretranslocation protein,alpha subunit [KO:K10956]
LMJF_25_1015  putative protein transport protein Sec61 gamma subunit [KO:K07342]
LMJF_35_4630  hypothetical protein [KO:K09540]
LMJF_35_1130  oligosaccharyl transferase-like protein [KO:K07151] [EC:2.4.99.18]
LMJF_35_1140  oligosaccharyl transferase-like protein [KO:K07151] [EC:2.4.99.18]
LMJF_35_1150  oligosaccharyl transferase-like protein [KO:K07151] [EC:2.4.99.18]
LMJF_35_1160  putative oligosaccharyl transferase subunit [KO:K07151] [EC:2.4.99.18]
LMJF_28_2200  hypothetical protein [KO:K01228] [EC:3.2.1.106]
LMJF_28_1200  putative glucose-regulated protein 78 [KO:K09490] [EC:3.6.4.10]
LMJF_14_1330  hypothetical protein [KO:K09523]
LMJF_18_0090  putative alpha glucosidase II subunit [KO:K05546] [EC:3.2.1.207]
LMJF_31_2600  putative calreticulin [KO:K08057]
LMJF_13_0670  putative lectin [KO:K10080]
LMJF_05_0030  putative ras-like small GTPases [KO:K07953] [EC:3.6.5.-]
LMJF_32_0050  putative protein transport protein Sec13 [KO:K14004]
LMJF_11_1160  putative protein transport protein Sec31 [KO:K14005]
LMJF_36_6430  protein transport protein Sec23-like protein [KO:K14006]
LMJF_25_1340  putative protein transport protein Sec24C [KO:K14007]
LMJF_29_2110  hypothetical protein [KO:K11718] [EC:2.4.1.-]
LMJF_26_0660  putative protein disulfide isomerase [KO:K09584] [EC:5.3.4.1]
LMJF_34_2200  hypothetical protein [KO:K09584] [EC:5.3.4.1]
LMJF_22_0260  hypothetical protein [KO:K13249]
LMJF_33_1800  hypothetical protein [KO:K13989]
LMJF_19_0130  hypothetical protein [KO:K13989]
LMJF_36_1370  putative Transitional endoplasmic reticulum ATPase [KO:K13525]
LMJF_25_1290  hypothetical protein [KO:K14015]
LMJF_36_6490  putative ubiquitin fusion degradation protein [KO:K14016]
LMJF_28_2780  putative heat-shock protein hsp70 [KO:K03283]
LMJF_28_2770  putative heat-shock protein hsp70 [KO:K03283]
LMJF_28_2820  putative heat shock protein 70 [KO:K03283]
LMJF_26_1240  HSP70.4; heat shock protein 70-related protein [KO:K03283]
LMJF_36_2110  hypothetical protein [KO:K09518]
LMJF_33_0360  HSP83-16; heat shock protein 83-1 [KO:K04079]
LMJF_33_0365  HSP83-17; heat shock protein 83-1 [KO:K04079]
LMJF_33_0350  HSP83-14; heat shock protein 83-1 [KO:K04079]
LMJF_33_0355  HSP83-15; heat shock protein 83-1 [KO:K04079]
LMJF_33_0340  HSP83-11; heat shock protein 83-1 [KO:K04079]
LMJF_33_0343  HSP83-12; heat shock protein 83-1 [KO:K04079]
LMJF_33_0346  HSP83-13; heat shock protein 83-1 [KO:K04079]
LMJF_33_0330  HSP83-8; heat shock protein 83-1 [KO:K04079]
LMJF_33_0333  HSP83-9; heat shock protein 83-1 [KO:K04079]
LMJF_33_0336  HSP83-10; heat shock protein 83-1 [KO:K04079]
LMJF_33_0320  HSP83-5; heat shock protein 83-1 [KO:K04079]
LMJF_33_0323  HSP83-6; heat shock protein 83-1 [KO:K04079]
LMJF_33_0326  HSP83-7; heat shock protein 83-1 [KO:K04079]
LMJF_33_0312  HSP83; heat shock protein 83-1 [KO:K04079]
LMJF_33_0314  HSP83-2; heat shock protein 83-1 [KO:K04079]
LMJF_33_0316  HSP83-3; heat shock protein 83-1 [KO:K04079]
LMJF_33_0318  HSP83-4; heat shock protein 83-1 [KO:K04079]
LMJF_29_2450  putative heat shock protein 20 [KO:K13993]
LMJF_36_6020  hypothetical protein [KO:K13719] [EC:3.1.2.-]
LMJF_24_1900  hypothetical protein [KO:K14018]
LMJF_30_3300  UV excision repair RAD23-like protein [KO:K10839]
LMJF_36_0540  putative ubiquitin-like protein [KO:K04523]
LMJF_03_0980  putative elongation initiation factor 2 alpha subunit [KO:K03237]
LMJF_34_0900  putative ubiquitin-conjugating enzyme E2 [KO:K04554] [EC:2.3.2.23]
LMJF_15_1410  hypothetical protein [KO:K10601] [EC:2.3.2.27]
LMJF_35_1300  putative ubiquitin-conjugating enzyme E2 [KO:K06689] [EC:2.3.2.23]
LMJF_21_0023  putative ring-box protein 1 [KO:K03868] [EC:2.3.2.32]
LMJF_24_1610  putative ring-box protein [KO:K03868] [EC:2.3.2.32]
LMJF_11_1210  putative S-phase kinase-associated protein [KO:K03094]
Compound
C00076  Calcium cation
G00009   
G00010   
G00011   
G00012   
G10694   
Reference
  Authors
Naidoo N
  Title
ER and aging-Protein folding and the ER stress response.
  Journal
Ageing Res Rev 8:150-9 (2009)
DOI:10.1016/j.arr.2009.03.001
Reference
  Authors
Malhotra JD, Kaufman RJ
  Title
The endoplasmic reticulum and the unfolded protein response.
  Journal
Semin Cell Dev Biol 18:716-31 (2007)
DOI:10.1016/j.semcdb.2007.09.003
Reference
  Authors
Maattanen P, Gehring K, Bergeron JJ, Thomas DY
  Title
Protein quality control in the ER: the recognition of misfolded proteins.
  Journal
Semin Cell Dev Biol 21:500-11 (2010)
DOI:10.1016/j.semcdb.2010.03.006
Reference
  Authors
Stolz A, Wolf DH
  Title
Endoplasmic reticulum associated protein degradation: a chaperone assisted journey to hell.
  Journal
Biochim Biophys Acta 1803:694-705 (2010)
DOI:10.1016/j.bbamcr.2010.02.005
Reference
  Authors
Dejgaard K, Theberge JF, Heath-Engel H, Chevet E, Tremblay ML, Thomas DY
  Title
Organization of the Sec61 translocon, studied by high resolution native electrophoresis.
  Journal
J Proteome Res 9:1763-71 (2010)
DOI:10.1021/pr900900x
Related
pathway
lma00510  N-Glycan biosynthesis
lma03050  Proteasome
lma03060  Protein export
KO pathway
ko04141   
LinkDB

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