KEGG   PATHWAY: loc00533
Entry
loc00533                    Pathway                                
Name
Glycosaminoglycan biosynthesis - keratan sulfate - Lepisosteus oculatus (spotted gar)
Description
Keratan sulfate (KS) is a glycosaminoglycan with the basic disaccharide unit of N-acetyllactosamine, Gal(b1-4)GlcNAc(b1-3), with sulfate esters at C-6 of GlcNAc and Gal residues. There are two types of KS distinguished by the protein linkage: type I for N-linked via the N-glycan core structure and type II for O-linked via the O-glycan core 2 structure.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
loc00533  Glycosaminoglycan biosynthesis - keratan sulfate
loc00533

Other DBs
GO: 0018146
Organism
Lepisosteus oculatus (spotted gar) [GN:loc]
Gene
102695396  fut8; alpha-(1,6)-fucosyltransferase isoform X1 [KO:K00717] [EC:2.4.1.68]
107077118  b4galt1; beta-1,4-galactosyltransferase 1 isoform X1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
102691443  beta-1,4-galactosyltransferase 1-like isoform X1 [KO:K07966] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
102695017  b4galt2; beta-1,4-galactosyltransferase 2 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
102692803  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
102682343  beta-1,4-galactosyltransferase 3-like [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
102696232  beta-1,4-galactosyltransferase 3-like isoform X1 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
102697837  b3gnt2; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [KO:K00741] [EC:2.4.1.149]
102689090  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like [KO:K00741] [EC:2.4.1.149]
102682540  carbohydrate sulfotransferase 5-like isoform X1 [KO:K09671] [EC:2.8.2.-]
102693001  b4galt4; beta-1,4-galactosyltransferase 4 [KO:K07969] [EC:2.4.1.90 2.4.1.275 2.4.1.-]
102695683  b3gnt7; UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [KO:K09664] [EC:2.4.1.-]
102698902  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like [KO:K09664] [EC:2.4.1.-]
102688225  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like [KO:K09664] [EC:2.4.1.-]
102696165  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like [KO:K09664] [EC:2.4.1.-]
102698126  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like [KO:K09664] [EC:2.4.1.-]
102692834  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like isoform X1 [KO:K09664] [EC:2.4.1.-]
102688431  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like [KO:K09664] [EC:2.4.1.-]
102690643  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like [KO:K09664] [EC:2.4.1.-]
102698485  carbohydrate sulfotransferase 1-like [KO:K01022] [EC:2.8.2.21]
102688946  chst1; carbohydrate sulfotransferase 1 [KO:K01022] [EC:2.8.2.21]
102684544  st3gal3; CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase isoform X1 [KO:K00781] [EC:2.4.3.6]
102692772  chst2; carbohydrate sulfotransferase 2 [KO:K04745] [EC:2.8.2.-]
102689819  st3gal1; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1 isoform X2 [KO:K00780] [EC:2.4.3.2 2.4.3.4]
102688940  st3gal2; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
Reference
PMID:11030741
  Authors
Funderburgh JL.
  Title
Keratan sulfate: structure, biosynthesis, and function.
  Journal
Glycobiology 10:951-958 (2000)
DOI:10.1093/glycob/10.10.951
Reference
PMID:14706853
  Authors
Seko A, Yamashita K.
  Title
beta1,3-N-Acetylglucosaminyltransferase-7 (beta3Gn-T7) acts efficiently on keratan sulfate-related glycans.
  Journal
FEBS Lett 556:216-20 (2004)
DOI:10.1016/S0014-5793(03)01440-6
Reference
PMID:12511560
  Authors
Seko A, Dohmae N, Takio K, Yamashita K.
  Title
Beta 1,4-galactosyltransferase (beta 4GalT)-IV is specific for GlcNAc 6-O-sulfate. Beta 4GalT-IV acts on keratan sulfate-related glycans and a precursor glycan of 6-sulfosialyl-Lewis X.
  Journal
J Biol Chem 278:9150-8 (2003)
DOI:10.1074/jbc.M211480200
Related
pathway
loc00510  N-Glycan biosynthesis
loc00512  Mucin type O-glycan biosynthesis
KO pathway
ko00533   
LinkDB

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