KEGG   PATHWAY: lsj00240
Entry
lsj00240                    Pathway                                
Name
Pyrimidine metabolism - Ligilactobacillus salivarius JCM1046
Class
Metabolism; Nucleotide metabolism
Pathway map
lsj00240  Pyrimidine metabolism
lsj00240

Module
lsj_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lsj00240]
lsj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lsj00240]
lsj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lsj00240]
Other DBs
GO: 0006220 0006213
Organism
Ligilactobacillus salivarius JCM1046 [GN:lsj]
Gene
LSJ_0236  carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
LSJ_0235  carA; Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
LSJ_0844  carA; Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
LSJ_0233  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
LSJ_0234  pyrC; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
LSJ_0237  pyrD; Dihydroorotate dehydrogenase [KO:K00226] [EC:1.3.98.1]
LSJ_0847  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
LSJ_0846  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
LSJ_0608  pyrH; Uridylate kinase [KO:K09903] [EC:2.7.4.22]
LSJ_2190c  Nucleotide diphosphate kinase [KO:K00940] [EC:2.7.4.6]
LSJ_0326  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
LSJ_0920c  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
LSJ_0830  udk; Uridine kinase [KO:K00876] [EC:2.7.1.48]
LSJ_0640  upp; Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
LSJ_0842  pyrR; Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein pyrR [KO:K02825] [EC:2.4.2.9]
LSJ_1325c  nrdD; Anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
LSJ_1213  nrdA; Ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
LSJ_1214  nrdB; Ribonucleoside-diphosphate reductase beta chain [KO:K00526] [EC:1.17.4.1]
LSJ_0739  comEB; ComE operon protein 2 [KO:K01493] [EC:3.5.4.12]
LSJ_1204c  Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
LSJ_1231c  dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
LSJ_3075c  Thymidine kinase [KO:K00857] [EC:2.7.1.21]
LSJ_0636  tdk; Thymidine kinase [KO:K00857] [EC:2.7.1.21]
LSJ_0769  thyA; Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
lsj00030  Pentose phosphate pathway
lsj00220  Arginine biosynthesis
lsj00250  Alanine, aspartate and glutamate metabolism
lsj00280  Valine, leucine and isoleucine degradation
KO pathway
ko00240   
LinkDB

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