KEGG   PATHWAY: mad00630
Entry
mad00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Marinobacter adhaerens
Class
Metabolism; Carbohydrate metabolism
Pathway map
mad00630  Glyoxylate and dicarboxylate metabolism
mad00630

Other DBs
GO: 0046487 0043648
Organism
Marinobacter adhaerens [GN:mad]
Gene
HP15_3234  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
HP15_923  acetyl-coA synthetase/AMP-(fatty) acid ligase [KO:K01895] [EC:6.2.1.1]
HP15_811  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
HP15_2188  glcB2; malate synthase G [KO:K01638] [EC:2.3.3.9]
HP15_1516  type II citrate synthase [KO:K01647] [EC:2.3.3.1]
HP15_3433  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
HP15_2203  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
HP15_5  atoB; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HP15_2423  acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
HP15_3943  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HP15_1009  acyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
HP15_2996  phbA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HP15_2344  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HP15_1233  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HP15_2784  3-ketoacyl-(acyl-carrier-protein) reductase [KO:K00023] [EC:1.1.1.36]
HP15_852  MaoC-like dehydratase [KO:K17865] [EC:4.2.1.55]
HP15_3024  FAD linked oxidase domain protein [KO:K00104] [EC:1.1.99.14]
HP15_3023  glycolate oxidase FAD binding subunit [KO:K11472] [EC:1.1.99.14]
HP15_3022  protein of unknown function cysteine-rich region domain protein [KO:K11473] [EC:1.1.99.14]
HP15_3938  D-isomer specific 2-hydroxyacid dehydrogenase family protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HP15_2931  hprA; glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
HP15_3287  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HP15_2220  HAD-superfamily hydrolase, subfamily IA, variant 3 [KO:K01091] [EC:3.1.3.18]
HP15_2963  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HP15_942  glutamate-putrescine ligase [KO:K01915] [EC:6.3.1.2]
HP15_428  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
HP15_3156  glutamate-ammonia ligase [KO:K01915] [EC:6.3.1.2]
HP15_489  glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HP15_65  lpdG; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
HP15_1657  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
HP15_1523  lpdG; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
HP15_3255  mercuric ion reductase [KO:K00382] [EC:1.8.1.4]
HP15_459  glycine cleavage H-protein, subgroup [KO:K02437]
HP15_3485  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
HP15_3486  3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase [KO:K00042] [EC:1.1.1.60]
HP15_1145  conserved hypothetical protein [KO:K15918] [EC:2.7.1.31]
HP15_817  leuB; 3-isopropylmalate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HP15_2177  2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HP15_4120  secreted protein containing molybdopterin oxidoreductase / molybdopterin dinucleotide-binding region [KO:K00123] [EC:1.17.1.9]
HP15_1574  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
HP15_4174  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
HP15_1573  formate dehydrogenase, beta subunit [KO:K22515] [EC:1.17.1.9]
HP15_4173  NADH dehydrogenase (quinone) [KO:K00124]
HP15_4119  4Fe-4S ferredoxin, iron-sulfur binding domain protein [KO:K00124]
HP15_4172  ATP synthase subunit E [KO:K00127]
HP15_4118  formate dehydrogenase, gamma subunit [KO:K00127]
HP15_1358  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HP15_3651  acetamidase/formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mad00010  Glycolysis / Gluconeogenesis
mad00020  Citrate cycle (TCA cycle)
mad00030  Pentose phosphate pathway
mad00053  Ascorbate and aldarate metabolism
mad00071  Fatty acid degradation
mad00230  Purine metabolism
mad00250  Alanine, aspartate and glutamate metabolism
mad00260  Glycine, serine and threonine metabolism
mad00620  Pyruvate metabolism
mad00710  Carbon fixation by Calvin cycle
mad00750  Vitamin B6 metabolism
mad00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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