KEGG   PATHWAY: mari00630
Entry
mari00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Marinobacter sp. CP1
Class
Metabolism; Carbohydrate metabolism
Pathway map
mari00630  Glyoxylate and dicarboxylate metabolism
mari00630

Other DBs
GO: 0046487 0043648
Organism
Marinobacter sp. CP1 [GN:mari]
Gene
ACP86_06710  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
ACP86_15695  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
ACP86_15170  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
ACP86_01100  malate synthase [KO:K01638] [EC:2.3.3.9]
ACP86_18590  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
ACP86_07690  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
ACP86_01175  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
ACP86_02480  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_05370  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_01895  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_17155  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_16015  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_10455  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_19590  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_19400  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ACP86_04210  3-oxoacyl-ACP synthase [KO:K00023] [EC:1.1.1.36]
ACP86_15375  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
ACP86_19405  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
ACP86_05610  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
ACP86_05605  glcE; glycolate oxidase [KO:K11472] [EC:1.1.99.14]
ACP86_05600  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
ACP86_10435  glyoxylate reductase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
ACP86_04890  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
ACP86_06955  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
ACP86_01255  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
ACP86_06385  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
ACP86_13250  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
ACP86_15780  gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
ACP86_13855  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
ACP86_06810  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
ACP86_18625  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
ACP86_13405  glycine cleavage system protein H [KO:K02437]
ACP86_07965  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
ACP86_07970  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
ACP86_16580  hypothetical protein [KO:K15918] [EC:2.7.1.31]
ACP86_15200  3-isopropylmalate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
ACP86_01025  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
ACP86_11155  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
ACP86_20505  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
ACP86_20500  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
ACP86_11150  formate dehydrogenase [KO:K00124]
ACP86_11145  formate dehydrogenase [KO:K00127]
ACP86_17805  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
ACP86_08670  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mari00010  Glycolysis / Gluconeogenesis
mari00020  Citrate cycle (TCA cycle)
mari00030  Pentose phosphate pathway
mari00053  Ascorbate and aldarate metabolism
mari00071  Fatty acid degradation
mari00230  Purine metabolism
mari00250  Alanine, aspartate and glutamate metabolism
mari00260  Glycine, serine and threonine metabolism
mari00620  Pyruvate metabolism
mari00710  Carbon fixation by Calvin cycle
mari00750  Vitamin B6 metabolism
mari00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system