KEGG   PATHWAY: mrr04111
Entry
mrr04111                    Pathway                                
Name
Cell cycle - yeast - Moniliophthora roreri
Description
Mitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps (G1 and G2 phases). G1, S, and G2 phases are collectively known as interphase. In yeast Cdc28 is the catalytic subunit of the cyclin-dependent kinase (CDK). At G1 phase Cdc28 associates with G1-cyclins Cln1 to Cln3, while B-type cyclins Clb1 to Clb6 regulate Cdc28 during S, G2, and M phases. Cln3/Cdc28 activity is required for cells to pass through 'start', the commitment point in G1. When Cln3/Cdc28 accumulates more than a certain threshold, SBF (Swi4/Swi6) and MBF (Mbp1/Swi6) are activated, promoting transcription of Cln1, Cln2, and other genes required for S-phase progression. Cln1 and Cln2 interacting with Cdc28 promote activation of B-type cyclin associated CDK, which drives DNA replication and entry into mitosis. Specifically, Cdc28 association with Clb2 and Clb1 promotes entry into mitosis. Cells suffering from DNA damage, spindle misorientation, or spindle assembly defect do not undergo the metaphase-anaphase transition for chromosome segregation and fail to exit from mitosis. The spindle assembly checkpoint activates Mad2, which in turn prevents chromosome segregation by inhibiting degradation of the securin Pds1. Moreover, Pds1 is phosphorylated and stabilized in response to DNA damage in a Chk1-dependent manner. The spindle checkpoint is also involved in the Cdc14 release from the nucleolus. Cdc14 dephosphorylates Swi5, Sic1, and Cdh1, leading to inhibition of Cdc28 and degradation of cyclin required for mitotic exit.
Class
Cellular Processes; Cell growth and death
Pathway map
mrr04111  Cell cycle - yeast
mrr04111

Other DBs
GO: 0000278
Organism
Moniliophthora roreri [GN:mrr]
Gene
Moror_10554  cdc2 cyclin-dependent kinase [KO:K04563] [EC:2.7.11.22]
Moror_7011  transcription factor [KO:K06648]
Moror_1457  transcription factor [KO:K06647]
Moror_17736  cell division control protein 6-like protein [KO:K02213]
Moror_3416  origin recognition complex subunit 1 [KO:K02603]
Moror_14214  origin recognition complex subunit 3-like [KO:K02605]
Moror_7372  origin recognition complex subunit 4 [KO:K02606]
Moror_6274  origin recognition complex subunit 5 [KO:K02607]
Moror_6382  dna replication licensing factor cdc19 (cell division control protein 19) [KO:K02540] [EC:5.6.2.3]
Moror_12706  dna replication licensing factor mcm3 [KO:K02541] [EC:5.6.2.3]
Moror_14213  cell division control protein 54 [KO:K02212] [EC:5.6.2.3]
Moror_258  dna replication licensing factor mcm5 [KO:K02209] [EC:5.6.2.3]
Moror_13875  dna replication licensing factor mcm6 [KO:K02542] [EC:5.6.2.3]
Moror_4887  dna replication licensing factor [KO:K02210] [EC:5.6.2.3]
Moror_12791  dbf4 -dependent protein kinase hsk1 [KO:K02214] [EC:2.7.11.1]
Moror_9019  g1 s regulator [KO:K02309]
Moror_9110  cell division control protein 45 [KO:K06628]
Moror_12500  mads box transcription factor mcm1 [KO:K12412]
Moror_6850  hypothetical protein [KO:K12411]
Moror_16192  mitogen-activated protein kinase [KO:K04371] [EC:2.7.11.24]
Moror_7769  cmgc mapk protein kinase [KO:K04371] [EC:2.7.11.24]
Moror_10140  anaphase promoting complex subunit 1 [KO:K03348]
Moror_3369  anaphase-promoting complex subunit 2 [KO:K03349]
Moror_6499  20s cyclosome subunit (nuc2 cdc27) [KO:K03350]
Moror_13255  anaphase-promoting complex component cut20 apc4 [KO:K03351]
Moror_415  imaginal discs arrested [KO:K03352]
Moror_2861  cell division control protein 16 [KO:K03353]
Moror_6331  cell division control protein 23 [KO:K03355]
Moror_1227  anaphase-promoting complex [KO:K03357]
Moror_14822  anaphase-promoting complex subunit apc11 [KO:K03358]
Moror_3047  wd repeat-containing protein slp1 [KO:K03363]
Moror_14552  cell division control protein [KO:K03363]
Moror_856  scf complex subunit skp1 [KO:K03094]
Moror_5545  sulfur metabolism regulator [KO:K03094]
Moror_13936  hypothetical protein [KO:K03347]
Moror_7592  ring-box protein 1 [KO:K03868] [EC:2.3.2.32]
Moror_8076  scf e3 ubiquitin ligase complex f-box protein grra [KO:K03360]
Moror_8087  scf e3 ubiquitin ligase complex f-box protein grra [KO:K03360]
Moror_2750  cell division control protein [KO:K03361]
Moror_2754  wd repeat containing protein pop1 [KO:K03361]
Moror_16363  f-box and wd repeat-containing protein [KO:K03361]
Moror_8832  cyclin [KO:K06656]
Moror_13180  hypothetical protein [KO:K06655] [EC:2.7.11.22]
Moror_1417  cyclin-dependent protein kinase inhibitor [KO:K06653]
Moror_24  homeobox transcription factor [KO:K02646]
Moror_13980  checkpoint protein kinase [KO:K08866] [EC:2.7.12.1]
Moror_11975  mitotic spindle checkpoint protein mad1 [KO:K06679]
Moror_17177  dna-binding horma domain-containing protein [KO:K02537]
Moror_14348  bub protein kinase [KO:K02178] [EC:2.7.11.1]
Moror_5746  mitotic checkpoint protein [KO:K02180]
Moror_7190  hypothetical protein [KO:K02307]
Moror_10767  camk camkl chk1 protein kinase [KO:K02216] [EC:2.7.11.1]
Moror_3206  cysteine-type endopeptidase [KO:K02365] [EC:3.4.22.49]
Moror_7039  protein phosphatase 2a regulatory b subunit [KO:K04354]
Moror_14287  serine threonine-protein phosphatase pp2a catalytic subunit [KO:K04382] [EC:3.1.3.16]
Moror_13248  protein phosphatase pp2a regulatory subunit a [KO:K03456]
Moror_16349  bub2 protein [KO:K02179]
Moror_10134  gtp binding protein [KO:K06682]
Moror_12661  agc ndr protein kinase [KO:K06684] [EC:2.7.11.-]
Moror_17486  mps one binder kinase activator-like 1a [KO:K06685]
Moror_3999  maintenance of ploidy protein mob2 [KO:K06685]
Moror_4000  maintenance of ploidy protein mob2 [KO:K06685]
Moror_1455  phosphoprotein phosphatase [KO:K06639] [EC:3.1.3.16 3.1.3.48]
Moror_3029  meiosis-specific apc c activator protein ama1 [KO:K03364]
Moror_2681  meiosis-specific apc c activator protein ama1 [KO:K03364]
Moror_10597  g2 mitotic-specific cyclin cdc13 [KO:K23469]
Moror_12154  g2 mitotic-specific cyclin cdc13 [KO:K23469]
Moror_6497  m-phase inducer phosphatase 3 [KO:K02555] [EC:3.1.3.48]
Moror_8373  cyclin-dependent kinase regulatory subunit [KO:K02219]
Moror_6757  other wee protein kinase [KO:K03114] [EC:2.7.11.1]
Moror_11831  sulfur metabolite repression control protein [KO:K10259]
Moror_6619  cmgc dyrk dyrk2 protein kinase [KO:K18669] [EC:2.7.12.1]
Moror_13136  shk1 kinase-binding protein 1 [KO:K02516] [EC:2.1.1.320]
Moror_1297  cell cycle checkpoint protein rad1 [KO:K02830] [EC:3.1.11.2]
Moror_2500  hypothetical protein [KO:K06662]
Moror_1425  hypothetical protein [KO:K11272]
Moror_13082  likely protein kinase [KO:K02831] [EC:2.7.11.-]
Moror_7356  dna-binding protein rfx2 isoform 4 [KO:K09173]
Moror_374  transcriptional corepressor [KO:K06665]
Moror_16550  general transcriptional repressor [KO:K06666]
Moror_9374  cohesin complex subunit psm1 [KO:K06636]
Moror_14847  chromosome segregation protein [KO:K06669]
Moror_6897  rad21 protein [KO:K06670]
Moror_14183  mitotic cohesin complex [KO:K06671]
Moror_2890  proline-rich protein rad9 [KO:K06672]
Moror_8678  nuclear condensin complex protein [KO:K06674]
Moror_1361  nuclear condensin complex subunit smc4 [KO:K06675]
Moror_17408  condensin complex component cnd2 [KO:K06676]
Moror_3198  chromosome condensation complex protein [KO:K06677]
Moror_12656  chromosome condensation complex protein [KO:K06678]
Moror_3203  condensin subunit cnd3 [KO:K06678]
Moror_7703  condensin subunit cnd3 [KO:K06678]
Compound
C00009  Orthophosphate
C00575  3',5'-Cyclic AMP
Reference
  Authors
Devault A, Vallen EA, Yuan T, Green S, Bensimon A, Schwob E
  Title
Identification of Tah11/Sid2 as the ortholog of the replication licensing factor Cdt1 in Saccharomyces cerevisiae.
  Journal
Curr Biol 12:689-94 (2002)
DOI:10.1016/S0960-9822(02)00768-6
Reference
  Authors
de Bruin RA, McDonald WH, Kalashnikova TI, Yates J 3rd, Wittenberg C
  Title
Cln3 activates G1-specific transcription via phosphorylation of the SBF bound repressor Whi5.
  Journal
Cell 117:887-98 (2004)
DOI:10.1016/j.cell.2004.05.025
Reference
  Authors
Costanzo M, Nishikawa JL, Tang X, Millman JS, Schub O, Breitkreuz K, Dewar D, Rupes I, Andrews B, Tyers M
  Title
CDK activity antagonizes Whi5, an inhibitor of G1/S transcription in yeast.
  Journal
Cell 117:899-913 (2004)
DOI:10.1016/j.cell.2004.05.024
Reference
  Authors
Pramila T, Miles S, GuhaThakurta D, Jemiolo D, Breeden LL
  Title
Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle.
  Journal
Genes Dev 16:3034-45 (2002)
DOI:10.1101/gad.1034302
Reference
  Authors
Schwickart M, Havlis J, Habermann B, Bogdanova A, Camasses A, Oelschlaegel T, Shevchenko A, Zachariae W
  Title
Swm1/Apc13 is an evolutionarily conserved subunit of the anaphase-promoting complex stabilizing the association of Cdc16 and Cdc27.
  Journal
Mol Cell Biol 24:3562-76 (2004)
DOI:10.1128/MCB.24.8.3562-3576.2004
Reference
  Authors
Penkner AM, Prinz S, Ferscha S, Klein F
  Title
Mnd2, an essential antagonist of the anaphase-promoting complex during meiotic prophase.
  Journal
Cell 120:789-801 (2005)
DOI:10.1016/j.cell.2005.01.017
Reference
  Authors
Pesin JA, Orr-Weaver TL
  Title
Regulation of APC/C activators in mitosis and meiosis.
  Journal
Annu Rev Cell Dev Biol 24:475-99 (2008)
DOI:10.1146/annurev.cellbio.041408.115949
Reference
PMID:7588610
  Authors
Dirick L, Bohm T, Nasmyth K
  Title
Roles and regulation of Cln-Cdc28 kinases at the start of the cell cycle of Saccharomyces cerevisiae.
  Journal
EMBO J 14:4803-13 (1995)
DOI:10.1002/j.1460-2075.1995.tb00162.x
Reference
  Authors
Bahler J
  Title
Cell-cycle control of gene expression in budding and fission yeast.
  Journal
Annu Rev Genet 39:69-94 (2005)
DOI:10.1146/annurev.genet.39.110304.095808
Reference
PMID:8066461
  Authors
Peter M, Herskowitz I
  Title
Direct inhibition of the yeast cyclin-dependent kinase Cdc28-Cln by Far1.
  Journal
Science 265:1228-31 (1994)
DOI:10.1126/science.8066461
Reference
PMID:9367986
  Authors
Henchoz S, Chi Y, Catarin B, Herskowitz I, Deshaies RJ, Peter M
  Title
Phosphorylation- and ubiquitin-dependent degradation of the cyclin-dependent kinase inhibitor Far1p in budding yeast.
  Journal
Genes Dev 11:3046-60 (1997)
DOI:10.1101/gad.11.22.3046
Reference
PMID:9346239
  Authors
Feldman RM, Correll CC, Kaplan KB, Deshaies RJ
  Title
A complex of Cdc4p, Skp1p, and Cdc53p/cullin catalyzes ubiquitination of the phosphorylated CDK inhibitor Sic1p.
  Journal
Cell 91:221-30 (1997)
DOI:10.1016/S0092-8674(00)80404-3
Reference
PMID:7954792
  Authors
Schwob E, Bohm T, Mendenhall MD, Nasmyth K
  Title
The B-type cyclin kinase inhibitor p40SIC1 controls the G1 to S transition in S. cerevisiae.
  Journal
Cell 79:233-44 (1994)
DOI:10.1016/0092-8674(94)90193-7
Reference
PMID:9841670
  Authors
Mendenhall MD, Hodge AE
  Title
Regulation of Cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae.
  Journal
Microbiol Mol Biol Rev 62:1191-243 (1998)
Reference
  Authors
Zachariae W, Nasmyth K
  Title
Whose end is destruction: cell division and the anaphase-promoting complex.
  Journal
Genes Dev 13:2039-58 (1999)
DOI:10.1101/gad.13.16.2039
Reference
  Authors
Jares P, Donaldson A, Blow JJ
  Title
The Cdc7/Dbf4 protein kinase: target of the S phase checkpoint?
  Journal
EMBO Rep 1:319-22 (2000)
DOI:10.1093/embo-reports/kvd076
Reference
  Authors
Elsasser S, Chi Y, Yang P, Campbell JL
  Title
Phosphorylation controls timing of Cdc6p destruction: A biochemical analysis.
  Journal
Mol Biol Cell 10:3263-77 (1999)
DOI:10.1091/mbc.10.10.3263
Reference
  Authors
Skowyra D, Koepp DM, Kamura T, Conrad MN, Conaway RC, Conaway JW, Elledge SJ, Harper JW
  Title
Reconstitution of G1 cyclin ubiquitination with complexes containing SCFGrr1 and Rbx1.
  Journal
Science 284:662-5 (1999)
DOI:10.1126/science.284.5414.662
Reference
  Authors
Mouillon JM, Persson BL
  Title
New aspects on phosphate sensing and signalling in Saccharomyces cerevisiae.
  Journal
FEMS Yeast Res 6:171-6 (2006)
DOI:10.1111/j.1567-1364.2006.00036.x
Reference
  Authors
Bean JM, Siggia ED, Cross FR
  Title
High functional overlap between MluI cell-cycle box binding factor and Swi4/6 cell-cycle box binding factor in the G1/S transcriptional program in Saccharomyces cerevisiae.
  Journal
Genetics 171:49-61 (2005)
DOI:10.1534/genetics.105.044560
Reference
PMID:9024629
  Authors
Deshaies RJ
  Title
Phosphorylation and proteolysis: partners in the regulation of cell division in budding yeast.
  Journal
Curr Opin Genet Dev 7:7-16 (1997)
DOI:10.1016/S0959-437X(97)80103-7
Reference
  Authors
Asano S, Park JE, Sakchaisri K, Yu LR, Song S, Supavilai P, Veenstra TD, Lee KS
  Title
Concerted mechanism of Swe1/Wee1 regulation by multiple kinases in budding yeast.
  Journal
EMBO J 24:2194-204 (2005)
DOI:10.1038/sj.emboj.7600683
Reference
PMID:9716410
  Authors
Kaiser P, Sia RA, Bardes EG, Lew DJ, Reed SI
  Title
Cdc34 and the F-box protein Met30 are required for degradation of the Cdk-inhibitory kinase Swe1.
  Journal
Genes Dev 12:2587-97 (1998)
DOI:10.1101/gad.12.16.2587
Reference
PMID:9925642
  Authors
Barral Y, Parra M, Bidlingmaier S, Snyder M
  Title
Nim1-related kinases coordinate cell cycle progression with the organization of the peripheral cytoskeleton in yeast.
  Journal
Genes Dev 13:176-87 (1999)
DOI:10.1101/gad.13.2.176
Reference
  Authors
Taylor SS
  Title
Chromosome segregation: dual control ensures fidelity.
  Journal
Curr Biol 9:R562-4 (1999)
DOI:10.1016/S0960-9822(99)80355-8
Reference
  Authors
Lew DJ, Burke DJ
  Title
The spindle assembly and spindle position checkpoints.
  Journal
Annu Rev Genet 37:251-82 (2003)
DOI:10.1146/annurev.genet.37.042203.120656
Reference
  Authors
Simanis V
  Title
Events at the end of mitosis in the budding and fission yeasts.
  Journal
J Cell Sci 116:4263-75 (2003)
DOI:10.1242/jcs.00807
Reference
PMID:8131744
  Authors
Toyn JH, Johnston LH
  Title
The Dbf2 and Dbf20 protein kinases of budding yeast are activated after the metaphase to anaphase cell cycle transition.
  Journal
EMBO J 13:1103-13 (1994)
DOI:10.1002/j.1460-2075.1994.tb06359.x
Reference
  Authors
Amon A
  Title
Together until separin do us part.
  Journal
Nat Cell Biol 3:E12-4 (2001)
DOI:10.1038/35050642
Reference
  Authors
Ciosk R, Shirayama M, Shevchenko A, Tanaka T, Toth A, Shevchenko A, Nasmyth K
  Title
Cohesin's binding to chromosomes depends on a separate complex consisting of Scc2 and Scc4 proteins.
  Journal
Mol Cell 5:243-54 (2000)
DOI:10.1016/S1097-2765(00)80420-7
Reference
  Authors
Freeman L, Aragon-Alcaide L, Strunnikov A
  Title
The condensin complex governs chromosome condensation and mitotic transmission of rDNA.
  Journal
J Cell Biol 149:811-24 (2000)
DOI:10.1083/jcb.149.4.811
Reference
  Authors
Fu Y, Pastushok L, Xiao W
  Title
DNA damage-induced gene expression in Saccharomyces cerevisiae.
  Journal
FEMS Microbiol Rev 32:908-26 (2008)
DOI:10.1111/j.1574-6976.2008.00126.x
Reference
  Authors
Friedel AM, Pike BL, Gasser SM
  Title
ATR/Mec1: coordinating fork stability and repair.
  Journal
Curr Opin Cell Biol 21:237-44 (2009)
DOI:10.1016/j.ceb.2009.01.017
Reference
  Authors
Chen SH, Zhou H
  Title
Reconstitution of Rad53 activation by Mec1 through adaptor protein Mrc1.
  Journal
J Biol Chem 284:18593-604 (2009)
DOI:10.1074/jbc.M109.018242
Reference
  Authors
Amon A
  Title
A decade of Cdc14--a personal perspective. Delivered on 9 July 2007 at the 32nd FEBS Congress in Vienna, Austria.
  Journal
FEBS J 275:5774-84 (2008)
DOI:10.1111/j.1742-4658.2008.06693.x
Related
pathway
mrr04120  Ubiquitin mediated proteolysis
KO pathway
ko04111   
LinkDB

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