KEGG   PATHWAY: obo04814
Entry
obo04814                    Pathway                                
Name
Motor proteins - Ooceraea biroi (clonal raider ant)
Class
Cellular Processes; Cell motility
Pathway map
obo04814  Motor proteins
obo04814

Organism
Ooceraea biroi (clonal raider ant) [GN:obo]
Gene
105282012  dynein heavy chain, cytoplasmic isoform X1 [KO:K10413]
105287272  cytoplasmic dynein 1 intermediate chain isoform X1 [KO:K10415]
105280807  cytoplasmic dynein 1 light intermediate chain 2 isoform X1 [KO:K10416]
105281814  cytoplasmic dynein 2 light intermediate chain 1 [KO:K10417]
105285427  dynein light chain 2, cytoplasmic [KO:K10418]
105278612  dynein light chain roadblock-type 2 [KO:K10419]
105285296  dynein light chain Tctex-type [KO:K10420]
105287954  LOW QUALITY PROTEIN: dynein heavy chain 5, axonemal [KO:K10408]
105285281  dynein heavy chain 2, axonemal [KO:K10408]
105286942  dynein heavy chain 3, axonemal [KO:K10408]
105275086  dynein heavy chain 7, axonemal [KO:K10408]
105287889  dynein heavy chain 7, axonemal [KO:K10408]
105286766  LOW QUALITY PROTEIN: dynein heavy chain 7, axonemal [KO:K10408]
105279602  dynein beta chain, ciliary [KO:K10408]
105277693  dynein heavy chain 10, axonemal [KO:K10408]
105282894  dynein heavy chain 8, axonemal [KO:K10408]
105288146  LOW QUALITY PROTEIN: dynein beta chain, ciliary [KO:K10408]
105277924  dynein heavy chain 1, axonemal [KO:K10408]
105287122  LOW QUALITY PROTEIN: dynein intermediate chain 2, ciliary [KO:K10409]
105281843  dynein intermediate chain 2, ciliary isoform X1 [KO:K10409]
105277375  LOW QUALITY PROTEIN: dynein intermediate chain 2, ciliary-like [KO:K10409]
105278319  dynein intermediate chain 2, axonemal [KO:K11143]
105278305  dynein intermediate chain 3, ciliary [KO:K11143]
105285805  dynein intermediate chain 2, axonemal [KO:K11143]
105287055  WD repeat-containing protein 63 [KO:K24722]
105287039  WD repeat-containing protein 78 [KO:K24723]
105275974  axonemal dynein light intermediate polypeptide 1 [KO:K10410]
105286699  dynein light chain 1, axonemal isoform X1 [KO:K10411]
105283996  dynein light chain 4, axonemal [KO:K10412]
113563597  dynein light chain 4, axonemal-like [KO:K10412]
105283999  dynein light chain 4, axonemal [KO:K10412]
105280060  dynactin subunit 1 isoform X1 [KO:K04648]
105275207  dynactin subunit 2 [KO:K10424]
105284337  dynactin subunit 3 [KO:K10425]
105281312  dynactin subunit 4 isoform X1 [KO:K10426]
105280065  dynactin subunit 5 [KO:K10427]
105286446  dynactin subunit 6 [KO:K10428]
105275199  actin-related protein 1 [KO:K16575]
105276532  actin-related protein 10 [KO:K16576]
105275529  F-actin-capping protein subunit alpha [KO:K10364]
105282278  F-actin-capping protein subunit beta [KO:K10365]
105282222  bicaudal D-related protein homolog [KO:K16756]
105276966  protein Hook homolog 3 [KO:K16536]
105277402  tubulin alpha-2/alpha-4 chain-like isoform X1 [KO:K07374]
105283909  tubulin alpha-1 chain [KO:K07374]
105276158  tubulin alpha-2/alpha-4 chain [KO:K07374]
105274822  tubulin alpha chain [KO:K07374]
105277469  tubulin beta chain isoform X1 [KO:K07375]
105277474  tubulin beta-1 chain [KO:K07375]
105277471  tubulin beta chain [KO:K07375]
105274652  tubulin gamma-1 chain [KO:K10389]
105274702  tubulin delta chain [KO:K10390]
105281005  tubulin epsilon chain [KO:K10391]
105279849  kinesin heavy chain isoform X1 [KO:K10396]
105287741  kinesin light chain isoform X1 [KO:K10407]
105277095  kinesin-like protein KIF3A [KO:K10394]
105280721  kinesin-like protein KIF3B [KO:K20196]
105286264  kinesin-associated protein 3 isoform X1 [KO:K25388]
105287750  osmotic avoidance abnormal protein 3 [KO:K20198]
105277906  kinesin-like protein unc-104 isoform X1 [KO:K10392]
105288061  RNA-binding protein 33 [KO:K17914]
105286127  kinesin-like protein KIF13B isoform X1 [KO:K17914]
105276616  kinesin-like protein KIF14 [KO:K17915]
105278004  kinesin-like protein Klp98A isoform X1 [KO:K17916]
105278799  uncharacterized protein LOC105278799 [KO:K17916]
105286211  chromosome-associated kinesin KIF4 isoform X1 [KO:K10395]
105280496  kinesin-like protein KIF21A isoform X1 [KO:K24185]
105287207  kinesin-like protein Klp61F [KO:K10398]
105287073  LOW QUALITY PROTEIN: kinesin-like protein Klp61F [KO:K10398]
105287015  kinesin-like protein KIF20B [KO:K10402]
105286216  kinesin-like protein KIF23 isoform X1 [KO:K17387]
105274895  centromere-associated protein E [KO:K11498]
105282842  kinesin-like protein KIN-7N [KO:K11498]
105274638  kinesin-like protein KIF18A [KO:K10401]
105279557  kinesin-like protein KIF19 [KO:K26157]
105287618  kinesin-like protein CG14535 isoform X1 [KO:K10404]
105284757  kinesin-like protein KIF12 [KO:K10399]
105275881  kinesin-like protein KIF2A isoform X1 [KO:K10393]
105274554  protein claret segregational [KO:K10405]
105277515  unconventional myosin-XIX [KO:K10356]
105281948  myosin-IA [KO:K10356]
105284760  myosin-IB isoform X1 [KO:K10356]
105276895  unconventional myosin-Ie [KO:K10356]
105285612  myosin-IIIb isoform X1 [KO:K08834] [EC:2.7.11.1]
105285322  neither inactivation nor afterpotential protein C [KO:K08834] [EC:2.7.11.1]
105277386  unconventional myosin-Va isoform X1 [KO:K10357]
105275556  myosin heavy chain 95F [KO:K10358]
105275805  myosin-VIIa [KO:K10359]
105274479  unconventional myosin-IXb isoform X1 [KO:K10360]
105287585  unconventional myosin-XV [KO:K10361]
105277110  unconventional myosin-XVIIIa isoform X1 [KO:K10362]
105283737  myosin heavy chain, muscle isoform X1 [KO:K17751]
105276601  myosin heavy chain, non-muscle isoform X1 [KO:K10352]
105286547  myosin-2 essential light chain isoform X1 [KO:K12751]
105274559  myosin regulatory light chain sqh [KO:K12757]
105278430  actin-5C [KO:K05692]
105284544  troponin T, skeletal muscle isoform X2 [KO:K12046]
105283597  troponin I isoform X1 [KO:K12044]
105278576  tropomyosin isoform X2 [KO:K10373]
105274749  tropomyosin-1 [KO:K10373]
105275685  tropomyosin-2 [KO:K10374]
Reference
  Authors
Hirokawa N, Niwa S, Tanaka Y
  Title
Molecular motors in neurons: transport mechanisms and roles in brain function, development, and disease.
  Journal
Neuron 68:610-38 (2010)
DOI:10.1016/j.neuron.2010.09.039
Reference
PMID:25470043 (PDB:4RH7)
  Authors
Schmidt H, Zalyte R, Urnavicius L, Carter AP
  Title
Structure of human cytoplasmic dynein-2 primed for its power stroke.
  Journal
Nature 518:435-438 (2015)
DOI:10.1038/nature14023
Reference
PMID:22398446 (PDB:3VKG 3VKH)
  Authors
Kon T, Oyama T, Shimo-Kon R, Imamula K, Shima T, Sutoh K, Kurisu G
  Title
The 2.8 A crystal structure of the dynein motor domain.
  Journal
Nature 484:345-50 (2012)
DOI:10.1038/nature10955
Reference
PMID:22997337 (PDB:3J1T 3J1U)
  Authors
Redwine WB, Hernandez-Lopez R, Zou S, Huang J, Reck-Peterson SL, Leschziner AE
  Title
Structural basis for microtubule binding and release by dynein.
  Journal
Science 337:1532-1536 (2012)
DOI:10.1126/science.1224151
Reference
  Authors
Gibbs KL, Greensmith L, Schiavo G
  Title
Regulation of Axonal Transport by Protein Kinases.
  Journal
Trends Biochem Sci 40:597-610 (2015)
DOI:10.1016/j.tibs.2015.08.003
Reference
PMID:28602352 (PDB:5NUG 5NVS 5NVU 5NW4)
  Authors
Zhang K, Foster HE, Rondelet A, Lacey SE, Bahi-Buisson N, Bird AW, Carter AP
  Title
Cryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated.
  Journal
Cell 169:1303-1314.e18 (2017)
DOI:10.1016/j.cell.2017.05.025
Reference
PMID:25814576 (PDB:5ADX 5AFR 5AFU)
  Authors
Urnavicius L, Zhang K, Diamant AG, Motz C, Schlager MA, Yu M, Patel NA, Robinson CV, Carter AP
  Title
The structure of the dynactin complex and its interaction with dynein.
  Journal
Science 347:1441-1446 (2015)
DOI:10.1126/science.aaa4080
Reference
PMID:29420470 (PDB:5OWO 6F1T 6F1U 6F1V 6F1Y 6F1Z 6F38 6F3A)
  Authors
Urnavicius L, Lau CK, Elshenawy MM, Morales-Rios E, Motz C, Yildiz A, Carter AP
  Title
Cryo-EM shows how dynactin recruits two dyneins for faster movement.
  Journal
Nature 554:202-206 (2018)
DOI:10.1038/nature25462
Reference
  Authors
Reck-Peterson SL, Redwine WB, Vale RD, Carter AP
  Title
The cytoplasmic dynein transport machinery and its many cargoes.
  Journal
Nat Rev Mol Cell Biol 19:382-398 (2018)
DOI:10.1038/s41580-018-0004-3
Reference
PMID:23434508 (PDB:3J2U)
  Authors
Asenjo AB, Chatterjee C, Tan D, DePaoli V, Rice WJ, Diaz-Avalos R, Silvestry M, Sosa H
  Title
Structural model for tubulin recognition and deformation by kinesin-13 microtubule depolymerases.
  Journal
Cell Rep 3:759-68 (2013)
DOI:10.1016/j.celrep.2013.01.030
Reference
PMID:10338210 (PDB:1B7T)
  Authors
Houdusse A, Kalabokis VN, Himmel D, Szent-Gyorgyi AG, Cohen C
  Title
Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head.
  Journal
Cell 97:459-70 (1999)
DOI:10.1016/s0092-8674(00)80756-4
Reference
PMID:9428521 (PDB:3KIN)
  Authors
Kozielski F, Sack S, Marx A, Thormahlen M, Schonbrunn E, Biou V, Thompson A, Mandelkow EM, Mandelkow E
  Title
The crystal structure of dimeric kinesin and implications for microtubule-dependent motility.
  Journal
Cell 91:985-94 (1997)
DOI:10.1016/s0092-8674(00)80489-4
Reference
PMID:8316857 (PDB:2MYS)
  Authors
Rayment I, Rypniewski WR, Schmidt-Base K, Smith R, Tomchick DR, Benning MM, Winkelmann DA, Wesenberg G, Holden HM
  Title
Three-dimensional structure of myosin subfragment-1: a molecular motor.
  Journal
Science 261:50-8 (1993)
DOI:10.1126/science.8316857
Reference
  Authors
Parker D, Bryant Z, Delp SL
  Title
Coarse-Grained Structural Modeling of Molecular Motors Using Multibody Dynamics.
  Journal
Cell Mol Bioeng 2:366-374 (2009)
DOI:10.1007/s12195-009-0084-4
Reference
  Authors
Dominguez R, Holmes KC
  Title
Actin structure and function.
  Journal
Annu Rev Biophys 40:169-86 (2011)
DOI:10.1146/annurev-biophys-042910-155359
Reference
PMID:31919429 (PDB:6KN7 6KN8)
  Authors
Yamada Y, Namba K, Fujii T
  Title
Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
  Journal
Nat Commun 11:153 (2020)
DOI:10.1038/s41467-019-14008-1
Reference
  Authors
Kruppa AJ, Buss F
  Title
Motor proteins at the mitochondria-cytoskeleton interface.
  Journal
J Cell Sci 134:239092 (2021)
DOI:10.1242/jcs.226084
KO pathway
ko04814   
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