KEGG   PATHWAY: pazo00630
Entry
pazo00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas azotoformans
Class
Metabolism; Carbohydrate metabolism
Pathway map
pazo00630  Glyoxylate and dicarboxylate metabolism
pazo00630

Module
pazo_M00621  Glycine cleavage system [PATH:pazo00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas azotoformans [GN:pazo]
Gene
AYR47_25615  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AYR47_02115  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AYR47_18355  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AYR47_30625  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AYR47_04295  malate synthase G [KO:K01638] [EC:2.3.3.9]
AYR47_16230  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
AYR47_19940  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AYR47_14975  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AYR47_03370  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AYR47_30110  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AYR47_22515  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AYR47_17715  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AYR47_24085  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AYR47_10455  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AYR47_31040  3-hydroxybutyryl-CoA dehydratase [KO:K17865] [EC:4.2.1.55]
AYR47_27875  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
AYR47_02770  catalase [KO:K03781] [EC:1.11.1.6]
AYR47_25770  catalase [KO:K03781] [EC:1.11.1.6]
AYR47_07430  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
AYR47_26330  catalase [KO:K03781] [EC:1.11.1.6]
AYR47_03630  catalase [KO:K03781] [EC:1.11.1.6]
AYR47_12110  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
AYR47_11890  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
AYR47_18225  hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
AYR47_03990  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AYR47_07300  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
AYR47_30360  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
AYR47_08870  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AYR47_17780  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AYR47_05425  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AYR47_05435  gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
AYR47_14840  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AYR47_19630  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AYR47_02735  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AYR47_04430  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AYR47_31320  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
AYR47_05545  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AYR47_31330  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AYR47_17580  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AYR47_16265  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AYR47_05540  glycine cleavage system protein H [KO:K02437]
AYR47_31315  glycine cleavage system protein H [KO:K02437]
AYR47_16160  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AYR47_18670  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AYR47_22680  glycerate kinase [KO:K00865] [EC:2.7.1.165]
AYR47_16150  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AYR47_21390  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
AYR47_21460  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
AYR47_01885  kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
AYR47_00605  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AYR47_04405  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AYR47_12445  acetamidase [KO:K01455] [EC:3.5.1.49]
AYR47_08985  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pazo00010  Glycolysis / Gluconeogenesis
pazo00020  Citrate cycle (TCA cycle)
pazo00030  Pentose phosphate pathway
pazo00053  Ascorbate and aldarate metabolism
pazo00071  Fatty acid degradation
pazo00230  Purine metabolism
pazo00250  Alanine, aspartate and glutamate metabolism
pazo00260  Glycine, serine and threonine metabolism
pazo00620  Pyruvate metabolism
pazo00710  Carbon fixation by Calvin cycle
pazo00750  Vitamin B6 metabolism
pazo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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