KEGG   PATHWAY: pcri03082
Entry
pcri03082                   Pathway                                
Name
ATP-dependent chromatin remodeling - Pelecanus crispus (Dalmatian pelican)
Class
Genetic Information Processing; Chromosome
Pathway map
pcri03082  ATP-dependent chromatin remodeling
pcri03082

Organism
Pelecanus crispus (Dalmatian pelican) [GN:pcri]
Gene
104034963  SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
104028390  BAZ1A; bromodomain adjacent to zinc finger domain protein 1A [KO:K11655]
104032347  tyrosine-protein kinase BAZ1B-like [KO:K11658]
104036933  BAZ2B; bromodomain adjacent to zinc finger domain protein 2B [KO:K26167]
104026207  CHRAC1; chromatin accessibility complex protein 1 [KO:K11656]
104028502  POLE3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
104028669  RSF1; LOW QUALITY PROTEIN: remodeling and spacing factor 1 [KO:K11657]
104035714  SMARCA1; probable global transcription activator SNF2L1 [KO:K11727] [EC:5.6.2.-]
104034993  BPTF; nucleosome-remodeling factor subunit BPTF [KO:K11728]
104028279  RBBP4; histone-binding protein RBBP4 [KO:K10752]
104028521  histone-binding protein RBBP7 [KO:K11659]
104024276  CHD4; chromodomain-helicase-DNA-binding protein 4 [KO:K11643] [EC:5.6.2.-]
104032354  HDAC2; histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
104025218  HDAC1; histone deacetylase 1 [KO:K06067] [EC:3.5.1.98]
104029683  methyl-CpG-binding domain protein 2 [KO:K11590]
104030042  MBD3; methyl-CpG-binding domain protein 3 [KO:K11591]
104035718  metastasis-associated protein MTA3-like [KO:K11660]
104032186  MTA1; metastasis-associated protein MTA1 [KO:K11660]
104030301  GATAD2A; transcriptional repressor p66-alpha [KO:K23194]
104030543  GATAD2B; transcriptional repressor p66-beta [KO:K23194]
104025072  PHF6; PHD finger protein 6 isoform X1 [KO:K23310]
104038782  CDK2AP1; cyclin-dependent kinase 2-associated protein 1 isoform X1 [KO:K26454]
104038570  SMARCA2; probable global transcription activator SNF2L2 [KO:K11647] [EC:5.6.2.-]
104031641  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [KO:K11648]
104038845  SWI/SNF complex subunit SMARCC1 [KO:K11649]
104031552  SMARCD2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [KO:K11650]
104032663  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 [KO:K11650]
104039186  SMARCE1; LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [KO:K11651]
104026204  LOW QUALITY PROTEIN: actin, cytoplasmic 1-like [KO:K05692]
104026703  actin, cytoplasmic type 5 isoform X1 [KO:K05692]
104025725  actin, cytoplasmic 2-like [KO:K05692]
104035044  ACTL6A; actin-like protein 6A [KO:K11340]
104024050  BCL7B; B-cell CLL/lymphoma 7 protein family member B [KO:K25605]
104026322  BCL7A; B-cell CLL/lymphoma 7 protein family member A [KO:K25605]
104025785  SS18L1; calcium-responsive transactivator isoform X1 [KO:K15623]
104037443  SS18; protein SSXT [KO:K15623]
104030521  ARID1A; AT-rich interactive domain-containing protein 1A [KO:K11653]
104026253  DPF3; zinc finger protein DPF3 [KO:K22198]
104035283  ARID2; LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2 [KO:K11765]
104027362  PBRM1; protein polybromo-1 [KO:K11757]
104037657  BRD7; LOW QUALITY PROTEIN: bromodomain-containing protein 7 [KO:K11723]
104032914  LOW QUALITY PROTEIN: PHD finger protein 10-like [KO:K22197]
104032737  BRD9; bromodomain-containing protein 9 [KO:K22184]
104028655  GLTSCR1L; GLTSCR1-like protein [KO:K25613]
104036903  INO80; DNA helicase INO80 [KO:K11665] [EC:5.6.2.-]
104029017  INO80C; LOW QUALITY PROTEIN: INO80 complex subunit C [KO:K11667]
104037730  INO80D; INO80 complex subunit D [KO:K11668]
104029765  NFRKB; nuclear factor related to kappa-B-binding protein [KO:K11671]
104034230  UCHL5; ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
104032620  RUVBL1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
104027151  ACTR5; actin-related protein 5 [KO:K11672]
104024577  ACTR8; actin-related protein 8 [KO:K11673]
104033252  DMAP1; DNA methyltransferase 1-associated protein 1 [KO:K11324]
104025868  YEATS4; YEATS domain-containing protein 4 [KO:K11341]
104030219  VPS72; LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 72 homolog [KO:K11664]
104026997  histone H2A-beta, sperm-like [KO:K11251]
104026998  histone H2A, sperm-like [KO:K11251]
104026081  LOW QUALITY PROTEIN: histone H2A.V-like [KO:K11251]
104038961  core histone macro-H2A.2 [KO:K11251]
104023722  LOW QUALITY PROTEIN: histone H2A.J-like [KO:K11251]
104027908  core histone macro-H2A.1 isoform X1 [KO:K11251]
104032657  histone H2A.V [KO:K11251]
104025938  histone H2A.Z [KO:K11251]
104024665  histone H2A.J [KO:K11251]
104024829  ACTR6; actin-related protein 6 [KO:K11662]
104034961  EP400; E1A-binding protein p400 [KO:K11320] [EC:5.6.2.-]
104028358  LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like [KO:K08874]
104027778  MORF4L1; mortality factor 4-like protein 1 [KO:K11339]
104024192  MRGBP; MRG/MORF4L-binding protein [KO:K11343]
104033751  BRD8; bromodomain-containing protein 8 [KO:K11321]
104024043  inhibitor of growth protein 3 [KO:K11319]
104027419  EPC2; enhancer of polycomb homolog 2 [KO:K11322]
104023815  enhancer of polycomb homolog 1 [KO:K11322]
104039154  MEAF6; chromatin modification-related protein MEAF6 [KO:K11344]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
LinkDB

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