Entry
Name
ABC transporters - Pantoea jilinensis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Pantoea jilinensis [GN:
pji ]
Gene
KTJ90_15945 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP [KO:K02063 ]
KTJ90_12975 potF; spermidine/putrescine ABC transporter substrate-binding protein PotF [KO:K11073 ]
KTJ90_04500 proX; glycine betaine/L-proline ABC transporter substrate-binding protein ProX [KO:K02002 ]
KTJ90_04505 proW; glycine betaine/L-proline ABC transporter permease ProW [KO:K02001 ]
KTJ90_20775 malE; maltose/maltodextrin ABC transporter substrate-binding protein MalE [KO:K10108 ]
KTJ90_20770 malK; maltose/maltodextrin ABC transporter ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
KTJ90_20330 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
KTJ90_17050 mlaD; outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067 ]
KTJ90_17055 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE [KO:K02066 ]
KTJ90_06325 mglB; galactose/glucose ABC transporter substrate-binding protein MglB [KO:K10540 ]
KTJ90_06335 mglC; galactose/methyl galactoside ABC transporter permease MglC [KO:K10541 ]
KTJ90_01545 ugpB; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB [KO:K05813 ]
KTJ90_14765 PstS family phosphate ABC transporter substrate-binding protein [KO:K02040 ]
KTJ90_00210 pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040 ]
KTJ90_05870 argT; lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT [KO:K10014 ]
KTJ90_13130 glnH; glutamine ABC transporter substrate-binding protein GlnH [KO:K10036 ]
KTJ90_01520 branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
KTJ90_01525 livH; high-affinity branched-chain amino acid ABC transporter permease LivH [KO:K01997 ]
KTJ90_01530 high-affinity branched-chain amino acid ABC transporter permease LivM [KO:K01998 ]
KTJ90_01535 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG [KO:K01995 ]
KTJ90_01540 livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF [KO:K01996 ]
KTJ90_08875 oppA; oligopeptide ABC transporter substrate-binding protein OppA [KO:K15580 ]
KTJ90_08895 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF [KO:K10823 ]
KTJ90_13055 gsiB; glutathione ABC transporter substrate-binding protein GsiB [KO:K13889 ]
KTJ90_15510 fhuD; Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD [KO:K23227 ]
KTJ90_15485 btuF; vitamin B12 ABC transporter substrate-binding protein BtuF [KO:K06858 ]
KTJ90_11885 lolE; lipoprotein-releasing ABC transporter permease subunit LolE [KO:K09808 ]
KTJ90_11895 lolC; lipoprotein-releasing ABC transporter permease subunit LolC [KO:K09808 ]
KTJ90_11890 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
KTJ90_14515 SmdA family multidrug ABC transporter permease/ATP-binding protein [KO:K18889 ]
KTJ90_14510 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein [KO:K18890 ]
KTJ90_12860 cydC; cysteine/glutathione ABC transporter ATP-binding protein/permease CydC [KO:K16012 ]
KTJ90_12855 cydD; cysteine/glutathione ABC transporter permease/ATP-binding protein CydD [KO:K16013 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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