KEGG   PATHWAY: pory01100
Entry
pory01100                   Pathway                                
Name
Metabolic pathways - Pseudomonas oryziphila
Class
Pathway map
pory01100  Metabolic pathways
pory01100

Module
pory_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pory01100]
pory_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pory01100]
pory_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pory01100]
pory_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pory01100]
pory_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pory01100]
pory_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pory01100]
pory_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pory01100]
pory_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pory01100]
pory_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pory01100]
pory_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pory01100]
pory_M00012  Glyoxylate cycle [PATH:pory01100]
pory_M00015  Proline biosynthesis, glutamate => proline [PATH:pory01100]
pory_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pory01100]
pory_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pory01100]
pory_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pory01100]
pory_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pory01100]
pory_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pory01100]
pory_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pory01100]
pory_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pory01100]
pory_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pory01100]
pory_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pory01100]
pory_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pory01100]
pory_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pory01100]
pory_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pory01100]
pory_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pory01100]
pory_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pory01100]
pory_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pory01100]
pory_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pory01100]
pory_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pory01100]
pory_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pory01100]
pory_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pory01100]
pory_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pory01100]
pory_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pory01100]
pory_M00063  CMP-KDO biosynthesis [PATH:pory01100]
pory_M00082  Fatty acid biosynthesis, initiation [PATH:pory01100]
pory_M00083  Fatty acid biosynthesis, elongation [PATH:pory01100]
pory_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pory01100]
pory_M00087  beta-Oxidation [PATH:pory01100]
pory_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pory01100]
pory_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pory01100]
pory_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pory01100]
pory_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pory01100]
pory_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pory01100]
pory_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pory01100]
pory_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pory01100]
pory_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pory01100]
pory_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pory01100]
pory_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pory01100]
pory_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pory01100]
pory_M00149  Succinate dehydrogenase, prokaryotes [PATH:pory01100]
pory_M00151  Cytochrome bc1 complex respiratory unit [PATH:pory01100]
pory_M00155  Cytochrome c oxidase, prokaryotes [PATH:pory01100]
pory_M00156  Cytochrome c oxidase, cbb3-type [PATH:pory01100]
pory_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pory01100]
pory_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pory01100]
pory_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pory01100]
pory_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pory01100]
pory_M00417  Cytochrome o ubiquinol oxidase [PATH:pory01100]
pory_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pory01100]
pory_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:pory01100]
pory_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pory01100]
pory_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pory01100]
pory_M00555  Betaine biosynthesis, choline => betaine [PATH:pory01100]
pory_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pory01100]
pory_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pory01100]
pory_M00621  Glycine cleavage system [PATH:pory01100]
pory_M00793  dTDP-L-rhamnose biosynthesis [PATH:pory01100]
pory_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pory01100]
pory_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pory01100]
pory_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pory01100]
pory_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pory01100]
pory_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pory01100]
pory_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pory01100]
pory_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pory01100]
pory_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pory01100]
pory_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pory01100]
pory_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pory01100]
pory_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pory01100]
pory_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pory01100]
pory_M00970  Proline degradation, proline => glutamate [PATH:pory01100]
pory_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pory01100]
Organism
Pseudomonas oryziphila [GN:pory]
Related
pathway
pory00010  Glycolysis / Gluconeogenesis
pory00020  Citrate cycle (TCA cycle)
pory00030  Pentose phosphate pathway
pory00040  Pentose and glucuronate interconversions
pory00051  Fructose and mannose metabolism
pory00052  Galactose metabolism
pory00053  Ascorbate and aldarate metabolism
pory00061  Fatty acid biosynthesis
pory00071  Fatty acid degradation
pory00130  Ubiquinone and other terpenoid-quinone biosynthesis
pory00190  Oxidative phosphorylation
pory00220  Arginine biosynthesis
pory00230  Purine metabolism
pory00240  Pyrimidine metabolism
pory00250  Alanine, aspartate and glutamate metabolism
pory00260  Glycine, serine and threonine metabolism
pory00261  Monobactam biosynthesis
pory00270  Cysteine and methionine metabolism
pory00280  Valine, leucine and isoleucine degradation
pory00290  Valine, leucine and isoleucine biosynthesis
pory00300  Lysine biosynthesis
pory00310  Lysine degradation
pory00311  Penicillin and cephalosporin biosynthesis
pory00330  Arginine and proline metabolism
pory00332  Carbapenem biosynthesis
pory00340  Histidine metabolism
pory00350  Tyrosine metabolism
pory00360  Phenylalanine metabolism
pory00361  Chlorocyclohexane and chlorobenzene degradation
pory00362  Benzoate degradation
pory00364  Fluorobenzoate degradation
pory00380  Tryptophan metabolism
pory00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pory00401  Novobiocin biosynthesis
pory00410  beta-Alanine metabolism
pory00430  Taurine and hypotaurine metabolism
pory00440  Phosphonate and phosphinate metabolism
pory00450  Selenocompound metabolism
pory00460  Cyanoamino acid metabolism
pory00470  D-Amino acid metabolism
pory00480  Glutathione metabolism
pory00500  Starch and sucrose metabolism
pory00520  Amino sugar and nucleotide sugar metabolism
pory00521  Streptomycin biosynthesis
pory00523  Polyketide sugar unit biosynthesis
pory00525  Acarbose and validamycin biosynthesis
pory00540  Lipopolysaccharide biosynthesis
pory00541  O-Antigen nucleotide sugar biosynthesis
pory00543  Exopolysaccharide biosynthesis
pory00550  Peptidoglycan biosynthesis
pory00552  Teichoic acid biosynthesis
pory00561  Glycerolipid metabolism
pory00562  Inositol phosphate metabolism
pory00564  Glycerophospholipid metabolism
pory00592  alpha-Linolenic acid metabolism
pory00620  Pyruvate metabolism
pory00622  Xylene degradation
pory00623  Toluene degradation
pory00625  Chloroalkane and chloroalkene degradation
pory00626  Naphthalene degradation
pory00627  Aminobenzoate degradation
pory00630  Glyoxylate and dicarboxylate metabolism
pory00633  Nitrotoluene degradation
pory00640  Propanoate metabolism
pory00643  Styrene degradation
pory00650  Butanoate metabolism
pory00660  C5-Branched dibasic acid metabolism
pory00670  One carbon pool by folate
pory00680  Methane metabolism
pory00710  Carbon fixation by Calvin cycle
pory00720  Other carbon fixation pathways
pory00730  Thiamine metabolism
pory00740  Riboflavin metabolism
pory00750  Vitamin B6 metabolism
pory00760  Nicotinate and nicotinamide metabolism
pory00770  Pantothenate and CoA biosynthesis
pory00780  Biotin metabolism
pory00785  Lipoic acid metabolism
pory00790  Folate biosynthesis
pory00860  Porphyrin metabolism
pory00900  Terpenoid backbone biosynthesis
pory00906  Carotenoid biosynthesis
pory00907  Pinene, camphor and geraniol degradation
pory00910  Nitrogen metabolism
pory00920  Sulfur metabolism
pory00930  Caprolactam degradation
pory00946  Degradation of flavonoids
pory00997  Biosynthesis of various other secondary metabolites
pory00999  Biosynthesis of various plant secondary metabolites
pory01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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