KEGG   PATHWAY: pory00230
Entry
pory00230                   Pathway                                
Name
Purine metabolism - Pseudomonas oryziphila
Class
Metabolism; Nucleotide metabolism
Pathway map
pory00230  Purine metabolism
pory00230

Module
pory_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pory00230]
pory_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pory00230]
pory_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pory00230]
pory_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pory00230]
pory_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pory00230]
pory_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pory00230]
pory_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pory00230]
Other DBs
GO: 0006163 0042278
Organism
Pseudomonas oryziphila [GN:pory]
Gene
EJA05_25590  NUDIX domain-containing protein [KO:K01515] [EC:3.6.1.13 3.6.1.-]
EJA05_01385  nudE; ADP compounds hydrolase NudE [KO:K08312] [EC:3.6.1.-]
EJA05_15020  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
EJA05_27510  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
EJA05_24155  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
EJA05_08375  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
EJA05_25100  purD; phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
EJA05_06740  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
EJA05_07580  hypothetical protein [KO:K11175] [EC:2.1.2.2]
EJA05_22290  formate-dependent phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
EJA05_22350  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
EJA05_06745  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
EJA05_27750  5-(carboxyamino)imidazole ribonucleotide synthase [KO:K01589] [EC:6.3.4.18]
EJA05_27755  purE; 5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
EJA05_21020  phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
EJA05_17995  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
EJA05_25095  purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
EJA05_19690  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
EJA05_15870  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
EJA05_21905  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
EJA05_01380  GMP/IMP nucleotidase [KO:K20881] [EC:3.1.3.-]
EJA05_19600  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
EJA05_04245  pgeF; peptidoglycan editing factor PgeF [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
EJA05_23990  hypoxanthine-guanine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
EJA05_22390  guaB; IMP dehydrogenase [KO:K00088] [EC:1.1.1.205]
EJA05_23150  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
EJA05_14140  hypothetical protein [KO:K00940] [EC:2.7.4.6]
EJA05_26625  rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [KO:K01519] [EC:3.6.1.66]
EJA05_27395  xpt; xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
EJA05_19760  xdhA; xanthine dehydrogenase small subunit [KO:K13481] [EC:1.17.1.4]
EJA05_19765  xdhB; xanthine dehydrogenase molybdopterin binding subunit [KO:K13482] [EC:1.17.1.4]
EJA05_22385  glutamine-hydrolyzing GMP synthase [KO:K01951] [EC:6.3.5.2]
EJA05_19775  guaD; guanine deaminase [KO:K01487] [EC:3.5.4.3]
EJA05_27560  guanylate kinase [KO:K00942] [EC:2.7.4.8]
EJA05_06590  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
EJA05_06585  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
EJA05_08915  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
EJA05_27590  guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
EJA05_00975  ppx; exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
EJA05_06715  GTP diphosphokinase [KO:K00951] [EC:2.7.6.5]
EJA05_00740  class I adenylate cyclase [KO:K05851] [EC:4.6.1.1]
EJA05_25440  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
EJA05_03440  amn; AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
EJA05_11650  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
EJA05_24785  adenosine deaminase [KO:K21053] [EC:3.5.4.2]
EJA05_06195  adenylate kinase [KO:K00939] [EC:2.7.4.3]
EJA05_06720  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
EJA05_25580  3',5'-cyclic-AMP phosphodiesterase [KO:K03651] [EC:3.1.4.53]
EJA05_02220  symmetrical bis(5'-nucleosyl)-tetraphosphatase [KO:K01525] [EC:3.6.1.41]
EJA05_04905  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
EJA05_04895  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
EJA05_08885  uraH; hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
EJA05_08730  Asp/Glu/hydantoin racemase [KO:K16841] [EC:5.1.99.3]
EJA05_08880  puuE; allantoinase PuuE [KO:K16842] [EC:3.5.2.5]
EJA05_14885  (S)-ureidoglycine aminohydrolase [KO:K14977] [EC:3.5.3.26]
EJA05_08870  ureidoglycolate lyase [KO:K01483] [EC:4.3.2.3]
EJA05_15830  ureC; urease subunit alpha [KO:K01428] [EC:3.5.1.5]
EJA05_15835  urease subunit beta [KO:K01429] [EC:3.5.1.5]
EJA05_15840  urease subunit gamma [KO:K01430] [EC:3.5.1.5]
EJA05_22575  arcC; carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pory00030  Pentose phosphate pathway
pory00220  Arginine biosynthesis
pory00250  Alanine, aspartate and glutamate metabolism
pory00260  Glycine, serine and threonine metabolism
pory00340  Histidine metabolism
pory00630  Glyoxylate and dicarboxylate metabolism
pory00730  Thiamine metabolism
pory00740  Riboflavin metabolism
pory00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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