Entry
Name
ABC transporters - Pseudocitrobacter corydidari
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Pseudocitrobacter corydidari [GN:
psgc ]
Gene
G163CM_17420 ssuC_2; Putative aliphatic sulfonates transport permease protein SsuC [KO:K15552 ]
G163CM_25000 ssuC_4; Putative aliphatic sulfonates transport permease protein SsuC [KO:K15552 ]
G163CM_17230 ssuC_1; Putative aliphatic sulfonates transport permease protein SsuC [KO:K15554 ]
G163CM_16050 potB; Spermidine/putrescine transport system permease protein PotB [KO:K11071 ]
G163CM_46630 proX; Glycine betaine/proline betaine-binding periplasmic protein [KO:K02002 ]
G163CM_46640 proW; Glycine betaine/proline betaine transport system permease protein ProW [KO:K02001 ]
G163CM_32750 malF; Maltose/maltodextrin transport system permease protein MalF [KO:K10109 ]
G163CM_32760 malG; Maltose/maltodextrin transport system permease protein MalG [KO:K10110 ]
G163CM_14090 malK_1; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
G163CM_32730 malK_3; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
G163CM_19840 ugpC_1; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
G163CM_41230 mlaC; Intermembrane phospholipid transport system binding protein MlaC [KO:K07323 ]
G163CM_41220 mlaD; Intermembrane phospholipid transport system binding protein MlaD [KO:K02067 ]
G163CM_41210 mlaE; Intermembrane phospholipid transport system permease protein MlaE [KO:K02066 ]
G163CM_41240 mlaB; Intermembrane phospholipid transport system binding protein MlaB [KO:K07122 ]
G163CM_41200 mlaF; Intermembrane phospholipid transport system ATP-binding protein MlaF [KO:K02065 ]
G163CM_38750 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA [KO:K05814 ]
G163CM_40330 yhdY; Inner membrane amino-acid ABC transporter permease protein YhdY [KO:K09971 ]
G163CM_38700 livH; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
G163CM_38720 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
G163CM_38730 livF_3; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
G163CM_20660 livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K11963 ]
G163CM_08940 livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K11963 ]
G163CM_16150 lolD; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
G163CM_23950 yheI; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI [KO:K18889 ]
G163CM_19140 macB; Macrolide export ATP-binding/permease protein MacB [KO:K05685 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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