KEGG   PATHWAY: psos00630
Entry
psos00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas sp. Os17
Class
Metabolism; Carbohydrate metabolism
Pathway map
psos00630  Glyoxylate and dicarboxylate metabolism
psos00630

Module
psos_M00621  Glycine cleavage system [PATH:psos00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas sp. Os17 [GN:psos]
Gene
POS17_4017  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
POS17_3073  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
POS17_4588  acsA2; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
POS17_5247  acsA_2; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
POS17_5630  malate synthase G [KO:K01638] [EC:2.3.3.9]
POS17_1734  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
POS17_1950  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
POS17_2640  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
POS17_3610  thiolase [KO:K00626] [EC:2.3.1.9]
POS17_3071  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
POS17_2305  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
POS17_2909  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
POS17_0697  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
POS17_3796  thiolase domain protein [KO:K00626] [EC:2.3.1.9]
POS17_1845  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
POS17_5249  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
POS17_4668  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
POS17_2244  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
POS17_2243  glcE; glycolate oxidase FAD binding subunit [KO:K11472] [EC:1.1.99.14]
POS17_2242  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
POS17_0078  katE; hydroperoxidase II [KO:K03781] [EC:1.11.1.6]
POS17_5321  katB; catalase KatB [KO:K03781] [EC:1.11.1.6]
POS17_5503  katA; catalase KatA [KO:K03781] [EC:1.11.1.6]
POS17_1008  D-isomer specific 2-hydroxyacid dehydrogenase family protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
POS17_5084  hprA; glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
POS17_0052  HAD hydrolase [KO:K01091] [EC:3.1.3.18]
POS17_5565  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
POS17_1803  HAD superfamily hydrolase [KO:K01091] [EC:3.1.3.18]
POS17_4559  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
POS17_0377  glnA_2; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
POS17_2919  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
POS17_2218  glnA_1; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
POS17_2329  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
POS17_2471  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
POS17_5870  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
POS17_5872  L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
POS17_5310  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
POS17_5663  glyA1; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
POS17_5011  glyA_1; glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
POS17_5902  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
POS17_4707  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
POS17_5905  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
POS17_4709  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
POS17_2533  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
POS17_0273  lpdA_2; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
POS17_1741  lpdA_1; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
POS17_5904  glycine cleavage system protein H [KO:K02437]
POS17_4706  gcvH2; glycine cleavage system protein H [KO:K02437]
POS17_1722  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
POS17_1721  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
POS17_2982  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
POS17_1720  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
POS17_3359  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
POS17_1719  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
POS17_3717  NAD-dependent aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
POS17_3803  ttuC; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
POS17_4675  keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
POS17_0325  NAD-dependent formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
POS17_0326  fdhA; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
POS17_0327  fdsB; NAD-dependent formate dehydrogenase subunit beta [KO:K00124]
POS17_0328  fdsG; formate dehydrogenase subunit gamma [KO:K00127]
POS17_0741  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
POS17_4762  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
POS17_5658  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
POS17_0401  hutG_2; N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
psos00010  Glycolysis / Gluconeogenesis
psos00020  Citrate cycle (TCA cycle)
psos00030  Pentose phosphate pathway
psos00053  Ascorbate and aldarate metabolism
psos00071  Fatty acid degradation
psos00230  Purine metabolism
psos00250  Alanine, aspartate and glutamate metabolism
psos00260  Glycine, serine and threonine metabolism
psos00620  Pyruvate metabolism
psos00710  Carbon fixation by Calvin cycle
psos00750  Vitamin B6 metabolism
psos00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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