KEGG   PATHWAY: pzd00630
Entry
pzd00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Stutzerimonas zhaodongensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
pzd00630  Glyoxylate and dicarboxylate metabolism
pzd00630

Module
pzd_M00621  Glycine cleavage system [PATH:pzd00630]
Other DBs
GO: 0046487 0043648
Organism
Stutzerimonas zhaodongensis [GN:pzd]
Gene
KQ248_14130  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
KQ248_14675  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
KQ248_18340  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KQ248_02010  malate synthase G [KO:K01638] [EC:2.3.3.9]
KQ248_06930  malate synthase G [KO:K01638] [EC:2.3.3.9]
KQ248_13770  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
KQ248_16725  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
KQ248_16210  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
KQ248_14475  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
KQ248_14755  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KQ248_15005  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KQ248_21435  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KQ248_10905  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
KQ248_02030  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
KQ248_02025  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
KQ248_02020  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
KQ248_03445  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
KQ248_00190  catalase [KO:K03781] [EC:1.11.1.6]
KQ248_11595  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
KQ248_21205  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
KQ248_03565  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
KQ248_19255  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
KQ248_01085  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
KQ248_02575  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KQ248_05160  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
KQ248_05170  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
KQ248_15080  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KQ248_00425  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KQ248_06040  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
KQ248_06030  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
KQ248_13805  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KQ248_06035  gcvH; glycine cleavage system protein GcvH [KO:K02437]
KQ248_20375  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
KQ248_10795  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
KQ248_20380  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
KQ248_20385  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
KQ248_20390  glycerate kinase [KO:K11529] [EC:2.7.1.165]
KQ248_10225  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
KQ248_17285  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
KQ248_05685  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
KQ248_05680  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
KQ248_16010  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
KQ248_17120  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
KQ248_05675  formate dehydrogenase [KO:K00124]
KQ248_16005  fdxH; formate dehydrogenase subunit beta [KO:K00124]
KQ248_05670  formate dehydrogenase subunit gamma [KO:K00127]
KQ248_16000  formate dehydrogenase subunit gamma [KO:K00127]
KQ248_20985  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pzd00010  Glycolysis / Gluconeogenesis
pzd00020  Citrate cycle (TCA cycle)
pzd00030  Pentose phosphate pathway
pzd00053  Ascorbate and aldarate metabolism
pzd00071  Fatty acid degradation
pzd00230  Purine metabolism
pzd00250  Alanine, aspartate and glutamate metabolism
pzd00260  Glycine, serine and threonine metabolism
pzd00620  Pyruvate metabolism
pzd00710  Carbon fixation by Calvin cycle
pzd00750  Vitamin B6 metabolism
pzd00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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