KEGG   PATHWAY: rsz00400
Entry
rsz00400                    Pathway                                
Name
Phenylalanine, tyrosine and tryptophan biosynthesis - Raphanus sativus (radish)
Class
Metabolism; Amino acid metabolism
Pathway map
rsz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rsz00400

Module
rsz_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rsz00400]
rsz_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rsz00400]
rsz_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:rsz00400]
rsz_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:rsz00400]
Other DBs
GO: 0009094 0006571 0000162
Organism
Raphanus sativus (radish) [GN:rsz]
Gene
108837331  phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [KO:K01626] [EC:2.5.1.54]
108824142  phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [KO:K01626] [EC:2.5.1.54]
108839746  phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [KO:K01626] [EC:2.5.1.54]
108809203  phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [KO:K01626] [EC:2.5.1.54]
108819094  phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [KO:K01626] [EC:2.5.1.54]
108819096  phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [KO:K01626] [EC:2.5.1.54]
108837527  phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [KO:K01626] [EC:2.5.1.54]
130506179  phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [KO:K01626] [EC:2.5.1.54]
130508230  LOW QUALITY PROTEIN: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [KO:K01626] [EC:2.5.1.54]
130508354  phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [KO:K01626] [EC:2.5.1.54]
130508356  phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [KO:K01626] [EC:2.5.1.54]
108828624  3-dehydroquinate synthase, chloroplastic [KO:K01735] [EC:4.2.3.4]
108862497  bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic isoform X1 [KO:K13832] [EC:4.2.1.10 1.1.1.25]
108812933  bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [KO:K13832] [EC:4.2.1.10 1.1.1.25]
108837670  shikimate kinase 1, chloroplastic [KO:K00891] [EC:2.7.1.71]
108842565  shikimate kinase 2, chloroplastic [KO:K00891] [EC:2.7.1.71]
108854750  3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic [KO:K00800] [EC:2.5.1.19]
108861545  chorismate synthase, chloroplastic isoform X1 [KO:K01736] [EC:4.2.3.5]
108819027  chorismate synthase, chloroplastic [KO:K01736] [EC:4.2.3.5]
130505143  chorismate synthase, chloroplastic-like [KO:K01736] [EC:4.2.3.5]
108845147  anthranilate synthase alpha subunit 2, chloroplastic [KO:K01657] [EC:4.1.3.27]
108844131  anthranilate synthase alpha subunit 1, chloroplastic [KO:K01657] [EC:4.1.3.27]
108814203  anthranilate synthase alpha subunit 1, chloroplastic [KO:K01657] [EC:4.1.3.27]
108823052  anthranilate synthase beta subunit 1, chloroplastic [KO:K01658] [EC:4.1.3.27]
108838740  anthranilate synthase beta subunit 1, chloroplastic [KO:K01658] [EC:4.1.3.27]
108839718  anthranilate phosphoribosyltransferase, chloroplastic [KO:K00766] [EC:2.4.2.18]
108818451  anthranilate phosphoribosyltransferase, chloroplastic [KO:K00766] [EC:2.4.2.18]
108843140  N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic isoform X2 [KO:K01817] [EC:5.3.1.24]
108837222  indole-3-glycerol phosphate synthase, chloroplastic [KO:K01609] [EC:4.1.1.48]
108862227  indole-3-glycerol phosphate synthase, chloroplastic [KO:K01609] [EC:4.1.1.48]
108855382  indole-3-glycerol phosphate synthase, chloroplastic [KO:K01609] [EC:4.1.1.48]
130512355  indole-3-glycerol phosphate synthase, chloroplastic-like [KO:K01609] [EC:4.1.1.48]
108823429  tryptophan synthase alpha chain [KO:K01695] [EC:4.2.1.20]
108862362  tryptophan synthase alpha chain, chloroplastic [KO:K01695] [EC:4.2.1.20]
108849526  tryptophan synthase beta chain 2, chloroplastic [KO:K01696] [EC:4.2.1.20]
108849705  tryptophan synthase beta chain 2, chloroplastic [KO:K01696] [EC:4.2.1.20]
108823654  tryptophan synthase beta chain 1, chloroplastic [KO:K01696] [EC:4.2.1.20]
108821080  tryptophan synthase beta chain 1 [KO:K01696] [EC:4.2.1.20]
108848641  uncharacterized protein LOC108848641 [KO:K06001] [EC:4.2.1.20]
108823896  chorismate mutase 1, chloroplastic [KO:K01850] [EC:5.4.99.5]
108829292  chorismate mutase 1, chloroplastic [KO:K01850] [EC:5.4.99.5]
108843149  chorismate mutase 2 isoform X1 [KO:K01850] [EC:5.4.99.5]
108828546  chorismate mutase 3, chloroplastic [KO:K01850] [EC:5.4.99.5]
108811545  chorismate mutase 1, chloroplastic [KO:K01850] [EC:5.4.99.5]
108833441  chorismate mutase 3, chloroplastic [KO:K01850] [EC:5.4.99.5]
108816447  chorismate mutase 3, chloroplastic-like [KO:K01850] [EC:5.4.99.5]
130503136  chorismate mutase 3, chloroplastic-like [KO:K01850] [EC:5.4.99.5]
108847856  arogenate dehydrogenase 1, chloroplastic [KO:K15227] [EC:1.3.1.78]
108811778  LOW QUALITY PROTEIN: arogenate dehydrogenase 2, chloroplastic [KO:K15227] [EC:1.3.1.78]
108857986  arogenate dehydrogenase 2, chloroplastic-like [KO:K15227] [EC:1.3.1.78]
108863458  arogenate dehydratase 4, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108856376  arogenate dehydratase/prephenate dehydratase 2, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108820626  arogenate dehydratase/prephenate dehydratase 1, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108833130  arogenate dehydratase 5, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108843520  arogenate dehydratase 5, chloroplastic-like [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108855202  arogenate dehydratase 3, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108860851  arogenate dehydratase/prephenate dehydratase 1, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108857314  LOW QUALITY PROTEIN: arogenate dehydratase/prephenate dehydratase 6, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108856936  arogenate dehydratase/prephenate dehydratase 2, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
130509985  arogenate dehydratase/prephenate dehydratase 1, chloroplastic [KO:K05359] [EC:4.2.1.91 4.2.1.51]
108827901  aspartate aminotransferase, cytoplasmic isozyme 2 isoform X1 [KO:K14454] [EC:2.6.1.1]
108826346  aspartate aminotransferase, cytoplasmic isozyme 2 [KO:K14454] [EC:2.6.1.1]
108814416  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
108862339  aspartate aminotransferase 3, chloroplastic [KO:K14454] [EC:2.6.1.1]
108843465  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
108813306  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
108848561  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
108832765  aspartate aminotransferase, chloroplastic [KO:K00811] [EC:2.6.1.1]
108841249  aspartate aminotransferase, chloroplastic isoform X1 [KO:K00811] [EC:2.6.1.1]
108849952  aspartate aminotransferase, chloroplastic [KO:K00811] [EC:2.6.1.1]
108811314  bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [KO:K15849] [EC:2.6.1.1 2.6.1.78 2.6.1.79]
108848628  bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [KO:K15849] [EC:2.6.1.1 2.6.1.78 2.6.1.79]
108835078  S-alkyl-thiohydroximate lyase SUR1 [KO:K00815] [EC:2.6.1.5]
108820767  probable aminotransferase TAT2 [KO:K00815] [EC:2.6.1.5]
108839484  probable aminotransferase TAT4 [KO:K00815] [EC:2.6.1.5]
108846081  probable aminotransferase TAT3 [KO:K00815] [EC:2.6.1.5]
108807388  LOW QUALITY PROTEIN: tyrosine aminotransferase [KO:K00815] [EC:2.6.1.5]
108810163  probable aminotransferase TAT3 [KO:K00815] [EC:2.6.1.5]
108818723  probable aminotransferase TAT4 [KO:K00815] [EC:2.6.1.5]
108836108  probable aminotransferase TAT3 [KO:K00815] [EC:2.6.1.5]
108841903  probable aminotransferase TAT1 [KO:K00815] [EC:2.6.1.5]
108854582  probable aminotransferase TAT3 [KO:K00815] [EC:2.6.1.5]
108853702  probable aminotransferase TAT4 [KO:K00815] [EC:2.6.1.5]
108852514  S-alkyl-thiohydroximate lyase SUR1-like [KO:K00815] [EC:2.6.1.5]
108813278  tyrosine aminotransferase [KO:K00815] [EC:2.6.1.5]
130502282  probable aminotransferase TAT4 [KO:K00815] [EC:2.6.1.5]
130508120  probable aminotransferase TAT1 [KO:K00815] [EC:2.6.1.5]
108820606  histidinol-phosphate aminotransferase 1, chloroplastic [KO:K00817] [EC:2.6.1.9]
Compound
C00074  Phosphoenolpyruvate
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00108  Anthranilate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00166  Phenylpyruvate
C00230  3,4-Dihydroxybenzoate
C00251  Chorismate
C00254  Prephenate
C00279  D-Erythrose 4-phosphate
C00296  Quinate
C00354  D-Fructose 1,6-bisphosphate
C00441  L-Aspartate 4-semialdehyde
C00463  Indole
C00493  Shikimate
C00587  3-Hydroxybenzoate
C00826  L-Arogenate
C00944  3-Dehydroquinate
C01094  D-Fructose 1-phosphate
C01179  3-(4-Hydroxyphenyl)pyruvate
C01269  5-O-(1-Carboxyvinyl)-3-phosphoshikimate
C01302  1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate
C02637  3-Dehydroshikimate
C03175  Shikimate 3-phosphate
C03506  Indoleglycerol phosphate
C04302  N-(5-Phospho-D-ribosyl)anthranilate
C04691  2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate
C16848  6-Deoxy-5-ketofructose 1-phosphate
C16850  2-Amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid
C17235  L-Homophenylalanine
C20327  2-Oxo-4-phenylbutyric acid
C20653  2-Benzylmalic acid
C20654  3-Benzylmalic acid
C20710  (4R,5R)-4,5-Dihydroxycyclohexa-1(6),2-diene-1-carboxylate
Related
pathway
rsz00010  Glycolysis / Gluconeogenesis
rsz00030  Pentose phosphate pathway
rsz00130  Ubiquinone and other terpenoid-quinone biosynthesis
rsz00350  Tyrosine metabolism
rsz00360  Phenylalanine metabolism
rsz00380  Tryptophan metabolism
rsz00710  Carbon fixation in photosynthetic organisms
rsz00790  Folate biosynthesis
rsz00901  Indole alkaloid biosynthesis
rsz00940  Phenylpropanoid biosynthesis
rsz00950  Isoquinoline alkaloid biosynthesis
rsz00960  Tropane, piperidine and pyridine alkaloid biosynthesis
rsz00966  Glucosinolate biosynthesis
KO pathway
ko00400   
LinkDB

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