KEGG   PATHWAY: sbq03082
Entry
sbq03082                    Pathway                                
Name
ATP-dependent chromatin remodeling - Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Class
Genetic Information Processing; Chromosome
Pathway map
sbq03082  ATP-dependent chromatin remodeling
sbq03082

Organism
Saimiri boliviensis boliviensis (Bolivian squirrel monkey) [GN:sbq]
Gene
101040352  SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [KO:K11654] [EC:5.6.2.-]
101052438  BAZ1A; bromodomain adjacent to zinc finger domain protein 1A isoform X2 [KO:K11655]
101029807  BAZ1B; tyrosine-protein kinase BAZ1B [KO:K11658]
101036798  BAZ2A; bromodomain adjacent to zinc finger domain protein 2A isoform X1 [KO:K15224]
101047940  BAZ2B; bromodomain adjacent to zinc finger domain protein 2B isoform X4 [KO:K26167]
101052003  CHRAC1; chromatin accessibility complex protein 1 [KO:K11656]
101053500  POLE3; DNA polymerase epsilon subunit 3 [KO:K02326] [EC:2.7.7.7]
101048660  RSF1; remodeling and spacing factor 1 [KO:K11657]
101037818  SMARCA1; probable global transcription activator SNF2L1 isoform X3 [KO:K11727] [EC:5.6.2.-]
101047770  BPTF; nucleosome-remodeling factor subunit BPTF isoform X1 [KO:K11728]
101047970  LOW QUALITY PROTEIN: histone-binding protein RBBP4-like [KO:K10752]
101030687  LOW QUALITY PROTEIN: histone-binding protein RBBP4-like [KO:K10752]
101037954  RBBP4; histone-binding protein RBBP4 [KO:K10752]
101031540  RBBP7; LOW QUALITY PROTEIN: histone-binding protein RBBP7 [KO:K11659]
101029680  chromatin complexes subunit BAP18 [KO:K23406]
101050848  CECR2; cat eye syndrome critical region protein 2 [KO:K25830]
101046633  CHD3; chromodomain-helicase-DNA-binding protein 3 isoform X3 [KO:K11642] [EC:5.6.2.-]
101027835  CHD4; chromodomain-helicase-DNA-binding protein 4 [KO:K11643] [EC:5.6.2.-]
101041477  HDAC2; histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
101039964  HDAC1; histone deacetylase 1 [KO:K06067] [EC:3.5.1.98]
101030925  MBD2; methyl-CpG-binding domain protein 2 [KO:K11590]
101036527  MBD3; methyl-CpG-binding domain protein 3 [KO:K11591]
101032231  MTA2; metastasis-associated protein MTA2 [KO:K11660]
101033775  MTA3; metastasis-associated protein MTA3 isoform X1 [KO:K11660]
101027888  MTA1; metastasis-associated protein MTA1 isoform X1 [KO:K11660]
101043624  GATAD2B; transcriptional repressor p66-beta isoform X1 [KO:K23194]
101046174  GATAD2A; transcriptional repressor p66-alpha isoform X1 [KO:K23194]
101052795  PHF6; PHD finger protein 6 isoform X2 [KO:K23310]
101035382  CDK2AP1; cyclin-dependent kinase 2-associated protein 1 [KO:K26454]
101030179  CDK2AP2; cyclin-dependent kinase 2-associated protein 2 isoform X1 [KO:K26455]
101052445  SMARCA4; transcription activator BRG1 [KO:K11647] [EC:5.6.2.-]
101035707  SMARCA2; probable global transcription activator SNF2L2 isoform X1 [KO:K11647] [EC:5.6.2.-]
101037648  SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1 [KO:K11648]
101040225  SMARCC1; SWI/SNF complex subunit SMARCC1 [KO:K11649]
101028240  SMARCC2; SWI/SNF complex subunit SMARCC2 [KO:K11649]
101029512  SMARCD1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2 [KO:K11650]
101041234  SMARCD3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1 [KO:K11650]
101038519  SMARCD2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [KO:K11650]
101033768  SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 [KO:K11651]
101037287  ACTB; actin, cytoplasmic 1 [KO:K05692]
101050060  actin, cytoplasmic 2-like isoform X1 [KO:K05692]
101049910  ACTG1; actin, cytoplasmic 2 [KO:K05692]
104651678  actin, cytoplasmic 1-like [KO:K05692]
101034204  ACTL6A; LOW QUALITY PROTEIN: actin-like protein 6A [KO:K11340]
101051206  ACTL6B; actin-like protein 6B isoform X1 [KO:K11652]
101029485  BCL7B; B-cell CLL/lymphoma 7 protein family member B [KO:K25605]
101040035  BCL7C; B-cell CLL/lymphoma 7 protein family member C [KO:K25605]
101044534  BCL7A; B-cell CLL/lymphoma 7 protein family member A isoform X1 [KO:K25605]
101047269  SS18L1; calcium-responsive transactivator isoform X1 [KO:K15623]
101041706  SS18; protein SSXT isoform X3 [KO:K15623]
101044635  ARID1B; AT-rich interactive domain-containing protein 1B isoform X6 [KO:K11653]
101037097  ARID1A; AT-rich interactive domain-containing protein 1A isoform X1 [KO:K11653]
101038484  DPF1; zinc finger protein neuro-d4 [KO:K22198]
101052635  DPF3; zinc finger protein DPF3 isoform X1 [KO:K22198]
101036462  DPF2; zinc finger protein ubi-d4 isoform X2 [KO:K13196]
101031750  ARID2; AT-rich interactive domain-containing protein 2 [KO:K11765]
101049097  PBRM1; protein polybromo-1 [KO:K11757]
101032994  BRD7; bromodomain-containing protein 7 isoform X1 [KO:K11723]
101043095  PHF10; PHD finger protein 10 isoform X1 [KO:K22197]
101034642  BRD9; bromodomain-containing protein 9 isoform X1 [KO:K22184]
101033963  GLTSCR1; glioma tumor suppressor candidate region gene 1 protein [KO:K25612]
101051663  GLTSCR1L; GLTSCR1-like protein [KO:K25613]
101032340  INO80; DNA helicase INO80 [KO:K11665] [EC:5.6.2.-]
101051016  INO80B; INO80 complex subunit B [KO:K11666]
101052547  INO80C; INO80 complex subunit C isoform X1 [KO:K11667]
101038624  INO80D; INO80 complex subunit D [KO:K11668]
101035157  INO80E; INO80 complex subunit E isoform X1 [KO:K11669]
101029136  TFPT; TCF3 fusion partner [KO:K11670]
101032469  NFRKB; nuclear factor related to kappa-B-binding protein isoform X4 [KO:K11671]
101051454  MCRS1; microspherule protein 1 isoform X2 [KO:K11674]
101051542  UCHL5; ubiquitin carboxyl-terminal hydrolase isozyme L5 [KO:K05610] [EC:3.4.19.12]
101039047  RUVBL1; ruvB-like 1 [KO:K04499] [EC:5.6.2.4]
101051248  RUVBL2; ruvB-like 2 [KO:K11338] [EC:5.6.2.3]
101032025  ACTR5; actin-related protein 5 [KO:K11672]
101034451  ACTR8; actin-related protein 8 [KO:K11673]
101037026  YY1; transcriptional repressor protein YY1 [KO:K09201]
101046072  YY2; transcription factor YY2 [KO:K09201]
101046207  SRCAP; helicase SRCAP isoform X1 [KO:K11661] [EC:5.6.2.-]
101036575  DMAP1; DNA methyltransferase 1-associated protein 1 [KO:K11324]
101041961  YEATS4; YEATS domain-containing protein 4 [KO:K11341]
101038662  vacuolar protein sorting-associated protein 72 homolog [KO:K11664]
101037137  VPS72; vacuolar protein sorting-associated protein 72 homolog [KO:K11664]
101053861  histone H2A.V [KO:K11251]
101044182  core histone macro-H2A.2 [KO:K11251]
101037059  uncharacterized protein LOC101037059 [KO:K11251]
101039214  histone H2A-Bbd type 2/3-like [KO:K11251]
101048953  histone H2A type 1 [KO:K11251]
104649848  histone H2A type 1-D [KO:K11251]
101052234  histone H2A type 1 [KO:K11251]
101050098  histone H2A type 1-C [KO:K11251]
101030413  histone H2A type 1-A [KO:K11251]
101052551  histone H2A type 2-B [KO:K11251]
101050376  core histone macro-H2A.1 isoform X1 [KO:K11251]
101035221  histone H2A-Bbd type 2/3-like [KO:K11251]
104650223  histone H2A-Bbd type 2/3 [KO:K11251]
104650372  histone H2A type 1-like [KO:K11251]
104650373  histone H2A type 1-H-like [KO:K11251]
101052866  histone H2A type 2-C [KO:K11251]
101052214  histone H2A type 2-A-like [KO:K11251]
101036985  histone H2A type 3 [KO:K11251]
101040049  histone H2A.J [KO:K11251]
101039271  histone H2A type 1 [KO:K11251]
101049544  histone H2AX [KO:K11251]
101027550  histone H2A type 1-H [KO:K11251]
101027857  histone H2A type 1 [KO:K11251]
101028941  ACTR6; actin-related protein 6 [KO:K11662]
101043982  ZNHIT1; zinc finger HIT domain-containing protein 1 [KO:K11663]
101041575  E1A-binding protein p400 isoform X2 [KO:K11320] [EC:5.6.2.-]
101042611  TRRAP; transformation/transcription domain-associated protein isoform X7 [KO:K08874]
101029750  LOW QUALITY PROTEIN: mortality factor 4-like protein 1 [KO:K11339]
101028928  MORF4L2; mortality factor 4-like protein 2 [KO:K11342]
101048543  MRGBP; MRG/MORF4L-binding protein [KO:K11343]
101042403  BRD8; bromodomain-containing protein 8 isoform X1 [KO:K11321]
101033943  ING3; inhibitor of growth protein 3 isoform X1 [KO:K11319]
101035631  EPC2; enhancer of polycomb homolog 2 isoform X1 [KO:K11322]
101041909  EPC1; enhancer of polycomb homolog 1 isoform X2 [KO:K11322]
101032241  MEAF6; chromatin modification-related protein MEAF6 [KO:K11344]
101041150  KAT5; histone acetyltransferase KAT5 isoform X4 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
LinkDB

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