KEGG   PATHWAY: sesp03430
Entry
sesp03430                   Pathway                                
Name
Mismatch repair - Saccharothrix espanaensis
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
sesp03430  Mismatch repair
sesp03430

Other DBs
GO: 0006298
Organism
Saccharothrix espanaensis [GN:sesp]
Gene
BN6_09350  UvrD/REP helicase [KO:K03657] [EC:5.6.2.4]
BN6_10090  uvrD; DNA helicase II like protein [KO:K03657] [EC:5.6.2.4]
BN6_78310  pcrA; ATP-dependent DNA helicase PcrA [KO:K03657] [EC:5.6.2.4]
BN6_20040  hypothetical protein [KO:K03657] [EC:5.6.2.4]
BN6_08120  xseA; Exodeoxyribonuclease 7 large subunit [KO:K03601] [EC:3.1.11.6]
BN6_08100  hypothetical protein [KO:K03602] [EC:3.1.11.6]
BN6_13200  hypothetical protein [KO:K03111]
BN6_19610  hypothetical protein [KO:K03111]
BN6_84630  ssb; Single-stranded DNA-binding protein [KO:K03111]
BN6_68820  dnaE1; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
BN6_00020  dnaN; DNA polymerase III, subunit beta [KO:K02338] [EC:2.7.7.7]
BN6_02940  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
BN6_02370  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
BN6_14420  hypothetical protein [KO:K02340] [EC:2.7.7.7]
BN6_03340  DNA-directed DNA polymerase [KO:K02341] [EC:2.7.7.7]
BN6_16300  hypothetical protein [KO:K02342] [EC:2.7.7.7]
BN6_84770  hypothetical protein [KO:K02342] [EC:2.7.7.7]
BN6_44800  ligA1; DNA ligase 1 [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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