KEGG   PATHWAY: sor03430
Entry
sor03430                    Pathway                                
Name
Mismatch repair - Streptococcus oralis
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
sor03430  Mismatch repair
sor03430

Other DBs
GO: 0006298
Organism
Streptococcus oralis [GN:sor]
Gene
SOR_1818  mutS; DNA mismatch repair protein MutS [KO:K03555]
SOR_1616  putative DNA mismatch repair protein, MutS2 family protein [KO:K07456]
SOR_1814  mutL; DNA mismatch repair protein MutL [KO:K03572]
SOR_0933  pcrA; ATP-dependent DNA helicase PcrA [KO:K03657] [EC:5.6.2.4]
SOR_0856  xseA; exodeoxyribonuclease VII, large subunit [KO:K03601] [EC:3.1.11.6]
SOR_0857  xseB; exodeoxyribonuclease VII, small subunit [KO:K03602] [EC:3.1.11.6]
SOR_1482  recJ; single-stranded DNA-specific exonuclease [KO:K07462] [EC:3.1.-.-]
SOR_0402  ssbB; single-strand DNA-binding protein B [KO:K03111]
SOR_0642  ssbA; single-strand DNA-binding protein [KO:K03111]
SOR_1150  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
SOR_0209  polC; DNA polymerase III, alpha subunit [KO:K03763] [EC:2.7.7.7]
SOR_0002  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
SOR_0833  dnaX; DNA polymerase III subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
SOR_0780  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
SOR_1225  holB; DNA polymerase III, delta prime subunit [KO:K02341] [EC:2.7.7.7]
SOR_1102  dnaQ; DNA polymerase III, epsilon chain [KO:K02342] [EC:2.7.7.7]
SOR_0958  ligA; DNA ligase, NAD-dependent [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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