KEGG   PATHWAY: spq02010
Entry
spq02010                    Pathway                                
Name
ABC transporters - Salmonella enterica subsp. enterica serovar Paratyphi B
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
spq02010  ABC transporters
spq02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Salmonella enterica subsp. enterica serovar Paratyphi B [GN:spq]
Gene
SPAB_00510  hypothetical protein [KO:K02048]
SPAB_05036  hypothetical protein [KO:K23163]
SPAB_00511  hypothetical protein [KO:K02046]
SPAB_00512  hypothetical protein [KO:K02047]
SPAB_00513  hypothetical protein [KO:K02045] [EC:7.3.2.3]
SPAB_03923  hypothetical protein [KO:K02020]
SPAB_02739  hypothetical protein [KO:K02020]
SPAB_02738  hypothetical protein [KO:K02018]
SPAB_02737  hypothetical protein [KO:K02017] [EC:7.3.2.5]
SPAB_02742  hypothetical protein [KO:K05776]
SPAB_00135  hypothetical protein [KO:K02064]
SPAB_00134  hypothetical protein [KO:K02063]
SPAB_00133  hypothetical protein [KO:K02062] [EC:7.6.2.15]
SPAB_02296  hypothetical protein [KO:K11069]
SPAB_02295  hypothetical protein [KO:K11070]
SPAB_02290  hypothetical protein [KO:K11071]
SPAB_02289  hypothetical protein [KO:K11072] [EC:7.6.2.11]
SPAB_02612  hypothetical protein [KO:K11073]
SPAB_02609  hypothetical protein [KO:K11074]
SPAB_02610  hypothetical protein [KO:K11075]
SPAB_02611  hypothetical protein [KO:K11076] [EC:7.6.2.16]
SPAB_03154  hypothetical protein [KO:K11081]
SPAB_03157  hypothetical protein [KO:K11082]
SPAB_03156  hypothetical protein [KO:K11083]
SPAB_03155  hypothetical protein [KO:K11084]
SPAB_03491  hypothetical protein [KO:K02002]
SPAB_03490  hypothetical protein [KO:K02001]
SPAB_03489  hypothetical protein [KO:K02000] [EC:7.6.2.9]
SPAB_00855  hypothetical protein [KO:K05845]
SPAB_01818  hypothetical protein [KO:K05845]
SPAB_00856  hypothetical protein [KO:K05846]
SPAB_00858  hypothetical protein [KO:K05846]
SPAB_01817  hypothetical protein [KO:K05846]
SPAB_01819  hypothetical protein [KO:K05846]
SPAB_00857  hypothetical protein [KO:K05847] [EC:7.6.2.9]
SPAB_01820  hypothetical protein [KO:K05847] [EC:7.6.2.9]
SPAB_05209  hypothetical protein [KO:K10108]
SPAB_05208  hypothetical protein [KO:K10109]
SPAB_05207  hypothetical protein [KO:K10110]
SPAB_05211  hypothetical protein [KO:K10111] [EC:7.5.2.-]
SPAB_04128  hypothetical protein [KO:K07323]
SPAB_04129  hypothetical protein [KO:K02067]
SPAB_04130  hypothetical protein [KO:K02066]
SPAB_04127  hypothetical protein [KO:K07122]
SPAB_04131  hypothetical protein [KO:K02065]
SPAB_04828  hypothetical protein [KO:K10439]
SPAB_04827  hypothetical protein [KO:K10440]
SPAB_04826  hypothetical protein [KO:K10441] [EC:7.5.2.7]
SPAB_04825  hypothetical protein [KO:K06726] [EC:5.4.99.62]
SPAB_00825  hypothetical protein [KO:K10540]
SPAB_00828  hypothetical protein [KO:K10541]
SPAB_00827  hypothetical protein [KO:K10542] [EC:7.5.2.11]
SPAB_04419  hypothetical protein [KO:K05813]
SPAB_04418  hypothetical protein [KO:K05814]
SPAB_04417  hypothetical protein [KO:K05815]
SPAB_04416  hypothetical protein [KO:K05816] [EC:7.6.2.10]
SPAB_04798  hypothetical protein [KO:K02040]
SPAB_04796  hypothetical protein [KO:K02037]
SPAB_04795  hypothetical protein [KO:K02038]
SPAB_04794  hypothetical protein [KO:K02036] [EC:7.3.2.1]
SPAB_00617  hypothetical protein [KO:K10013]
SPAB_00621  hypothetical protein [KO:K10015]
SPAB_00620  hypothetical protein [KO:K10016]
SPAB_00622  hypothetical protein [KO:K10017] [EC:7.4.2.1]
SPAB_00618  hypothetical protein [KO:K10014]
SPAB_02672  hypothetical protein [KO:K10036]
SPAB_02673  hypothetical protein [KO:K10037]
SPAB_02674  hypothetical protein [KO:K10038] [EC:7.4.2.1]
SPAB_02601  hypothetical protein [KO:K09996]
SPAB_05484  hypothetical protein [KO:K09996]
SPAB_02598  hypothetical protein [KO:K09997]
SPAB_02600  hypothetical protein [KO:K09998]
SPAB_02599  hypothetical protein [KO:K09999]
SPAB_02597  hypothetical protein [KO:K10000] [EC:7.4.2.1]
SPAB_02884  hypothetical protein [KO:K10001]
SPAB_02887  hypothetical protein [KO:K10002]
SPAB_02886  hypothetical protein [KO:K10003]
SPAB_02888  hypothetical protein [KO:K10004] [EC:7.4.2.1]
SPAB_01201  hypothetical protein [KO:K02424]
SPAB_01204  hypothetical protein [KO:K10009]
SPAB_01205  hypothetical protein [KO:K10010] [EC:7.4.2.1]
SPAB_04426  hypothetical protein [KO:K01999]
SPAB_04431  hypothetical protein [KO:K01999]
SPAB_04425  hypothetical protein [KO:K01997]
SPAB_04424  hypothetical protein [KO:K01998]
SPAB_04423  hypothetical protein [KO:K01995]
SPAB_04422  hypothetical protein [KO:K01996]
SPAB_03054  hypothetical protein [KO:K02073]
SPAB_00311  hypothetical protein [KO:K02073]
SPAB_03052  hypothetical protein [KO:K02072]
SPAB_00312  hypothetical protein [KO:K02072]
SPAB_03053  hypothetical protein [KO:K02071]
SPAB_00313  hypothetical protein [KO:K02071]
SPAB_01497  hypothetical protein [KO:K15580]
SPAB_01580  hypothetical protein [KO:K15580]
SPAB_01498  hypothetical protein [KO:K15581]
SPAB_01499  hypothetical protein [KO:K15582]
SPAB_01500  hypothetical protein [KO:K15583]
SPAB_01501  hypothetical protein [KO:K10823]
SPAB_04512  hypothetical protein [KO:K12368]
SPAB_04510  hypothetical protein [KO:K12369]
SPAB_04509  hypothetical protein [KO:K12370]
SPAB_04508  hypothetical protein [KO:K12371]
SPAB_04507  hypothetical protein [KO:K12372]
SPAB_01566  hypothetical protein [KO:K19226]
SPAB_01565  hypothetical protein [KO:K19227]
SPAB_01564  hypothetical protein [KO:K19228]
SPAB_01563  hypothetical protein [KO:K19229]
SPAB_01562  hypothetical protein [KO:K19230]
SPAB_02648  hypothetical protein [KO:K13889]
SPAB_02647  hypothetical protein [KO:K13890]
SPAB_02646  hypothetical protein [KO:K13891]
SPAB_02649  hypothetical protein [KO:K13892]
SPAB_00785  hypothetical protein [KO:K13893]
SPAB_00784  hypothetical protein [KO:K13894]
SPAB_00783  hypothetical protein [KO:K13895]
SPAB_00782  hypothetical protein [KO:K13896]
SPAB_02969  hypothetical protein [KO:K23185]
SPAB_02971  hypothetical protein [KO:K23186]
SPAB_02972  hypothetical protein [KO:K23187]
SPAB_02973  hypothetical protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
SPAB_00247  hypothetical protein [KO:K23227]
SPAB_00248  hypothetical protein [KO:K23228]
SPAB_00246  hypothetical protein [KO:K10829] [EC:7.2.2.16]
SPAB_00264  hypothetical protein [KO:K06858]
SPAB_01997  hypothetical protein [KO:K06073]
SPAB_01995  hypothetical protein [KO:K06074] [EC:7.6.2.8]
SPAB_01275  hypothetical protein [KO:K09815]
SPAB_01273  hypothetical protein [KO:K09816]
SPAB_01274  hypothetical protein [KO:K09817] [EC:7.2.2.20]
SPAB_03559  hypothetical protein [KO:K11604]
SPAB_03561  hypothetical protein [KO:K11605]
SPAB_03562  hypothetical protein [KO:K11606]
SPAB_03560  hypothetical protein [KO:K11607]
SPAB_01083  hypothetical protein [KO:K02009]
SPAB_01082  hypothetical protein [KO:K02007]
SPAB_01084  hypothetical protein [KO:K02008]
SPAB_01085  hypothetical protein [KO:K02006]
SPAB_03832  hypothetical protein [KO:K16785]
SPAB_03833  hypothetical protein [KO:K16786] [EC:7.-.-.-]
SPAB_03834  hypothetical protein [KO:K16787] [EC:7.-.-.-]
SPAB_05051  hypothetical protein [KO:K10555]
SPAB_05049  hypothetical protein [KO:K10556]
SPAB_05050  hypothetical protein [KO:K10557]
SPAB_05047  hypothetical protein [KO:K10558]
SPAB_02811  hypothetical protein [KO:K09690]
SPAB_02810  hypothetical protein [KO:K09691] [EC:7.5.2.14]
SPAB_02299  hypothetical protein [KO:K09808]
SPAB_02301  hypothetical protein [KO:K09808]
SPAB_02300  hypothetical protein [KO:K09810] [EC:7.6.2.-]
SPAB_00741  hypothetical protein [KO:K02196]
SPAB_04752  hypothetical protein [KO:K02196]
SPAB_00740  hypothetical protein [KO:K02195]
SPAB_04753  hypothetical protein [KO:K02195]
SPAB_00739  hypothetical protein [KO:K02194]
SPAB_04754  hypothetical protein [KO:K02194]
SPAB_00738  hypothetical protein [KO:K02193] [EC:7.6.2.5]
SPAB_04755  hypothetical protein [KO:K02193] [EC:7.6.2.5]
SPAB_05636  hypothetical protein [KO:K07091]
SPAB_05637  hypothetical protein [KO:K11720]
SPAB_04137  hypothetical protein [KO:K06861] [EC:7.5.2.5]
SPAB_04434  hypothetical protein [KO:K09811]
SPAB_04435  hypothetical protein [KO:K09812]
SPAB_02530  hypothetical protein [KO:K11085] [EC:7.5.2.6]
SPAB_03115  hypothetical protein [KO:K18889]
SPAB_03114  hypothetical protein [KO:K18890]
SPAB_03445  hypothetical protein [KO:K18895]
SPAB_03409  hypothetical protein [KO:K12541]
SPAB_05251  hypothetical protein [KO:K12541]
SPAB_02566  hypothetical protein [KO:K16012]
SPAB_02565  hypothetical protein [KO:K16013]
SPAB_02581  hypothetical protein [KO:K05685] [EC:7.6.2.-]
SPAB_00727  hypothetical protein [KO:K06159]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
LinkDB

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