KEGG   PATHWAY: tasa04141
Entry
tasa04141                   Pathway                                
Name
Protein processing in endoplasmic reticulum - Trichosporon asahii var. asahii
Description
The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
tasa04141  Protein processing in endoplasmic reticulum
tasa04141

Other DBs
GO: 0030433 0034976
Organism
Trichosporon asahii var. asahii [GN:tasa]
Gene
A1Q1_02607  sec61p-like protein, Ssh1p [KO:K10956]
A1Q1_05243  SSS1-ER protein-translocase complex subunit [KO:K07342]
A1Q1_03997  hypothetical protein [KO:K12275]
A1Q1_06212  hypothetical protein [KO:K09540]
A1Q1_06964  oligosaccharyltransferase alpha subunit [KO:K12666]
A1Q1_00284  hypothetical protein [KO:K12667]
A1Q1_06960  dolichyl-diphosphooligosaccharide-protein glycotransferase [KO:K12669]
A1Q1_02107  hypothetical protein [KO:K07151] [EC:2.4.99.18]
A1Q1_05592  hypothetical protein [KO:K09486]
A1Q1_02366  heat shock protein [KO:K09490] [EC:3.6.4.10]
A1Q1_04630  endoplasmic reticulum protein [KO:K09521]
A1Q1_01362  co-chaperone [KO:K09523]
A1Q1_02334  chaperone regulator [KO:K14002]
A1Q1_01278  cation-transporting ATPase [KO:K09487]
A1Q1_06625  alpha glucosidase [KO:K05546] [EC:3.2.1.207]
A1Q1_02339  endoplasmic reticulum protein [KO:K08288]
A1Q1_05238  ER-associated protein catabolism-related protein [KO:K08054]
A1Q1_07106  mannosyl-oligosaccharide 1,2-alpha-mannosidase [KO:K01230] [EC:3.2.1.113]
A1Q1_06697  hypothetical protein [KO:K23741] [EC:3.2.1.209]
A1Q1_03675  lectin [KO:K10082]
A1Q1_02355  membrane glycoprotein spo14 [KO:K14003]
A1Q1_03543  SAR small monomeric GTPase [KO:K07953] [EC:3.6.5.-]
A1Q1_06502  vesicle budding-related protein [KO:K14004]
A1Q1_04909  protein transport protein SEC31 [KO:K14005]
A1Q1_02616  protein transport protein SEC23 [KO:K14006]
A1Q1_04332  ER to golgi family transport-related protein [KO:K14007]
A1Q1_02717  ER to golgi family transport-related protein [KO:K14007]
A1Q1_05386  UDP-glucose:glycoprotein glucosyltransferase [KO:K11718] [EC:2.4.1.-]
A1Q1_03470  hypothetical protein [KO:K10084]
A1Q1_02254  hypothetical protein [KO:K09580] [EC:5.3.4.1]
A1Q1_05611  disulfide-isomerase precursor [KO:K09584] [EC:5.3.4.1]
A1Q1_06036  protein disulfide isomerase [KO:K09584] [EC:5.3.4.1]
A1Q1_06310  endoplasmic oxidoreductin 1 precursor [KO:K10976] [EC:1.8.4.-]
A1Q1_06117  hypothetical protein [KO:K10088]
A1Q1_05888  hypothetical protein [KO:K13249]
A1Q1_07619  endoplasmic reticulum protein [KO:K14009]
A1Q1_06872  derlin-like protein [KO:K13989]
A1Q1_02502  DNA-binding protein [KO:K24348]
A1Q1_04337  glycogen metabolism-related protein [KO:K14012]
A1Q1_06748  glycogen metabolism-related protein [KO:K14012]
A1Q1_08223  MMS2 protein [KO:K13525]
A1Q1_03891  ER-associated protein catabolism-related protein [KO:K14015]
A1Q1_00952  ubiquitin fusion-degradation 1-like protein [KO:K14016]
A1Q1_05051  heat shock protein 70 [KO:K03283]
A1Q1_01353  heat shock protein HSP60 [KO:K03283]
A1Q1_02068  heat shock protein [KO:K03283]
A1Q1_07847  chaperone regulator [KO:K09503]
A1Q1_08305  chaperone regulator [KO:K09503]
A1Q1_04358  endoplasmic reticulum protein [KO:K09518]
A1Q1_00899  chaperone [KO:K04079]
A1Q1_02229  adenyl-nucleotide exchange factor [KO:K09562]
A1Q1_02859  Phospholipase A-2-activating protein [KO:K14018]
A1Q1_03199  hypothetical protein [KO:K10839]
A1Q1_05047  hypothetical protein [KO:K04523]
A1Q1_03933  hypothetical protein [KO:K01456] [EC:3.5.1.52]
A1Q1_05656  ubiquitin chain assembly factor, Ufd2p [KO:K10597] [EC:2.3.2.27]
A1Q1_02486  eukaryotic translation initiation factor 2 subunit alpha [KO:K03237]
A1Q1_01382  hypothetical protein [KO:K07765] [EC:3.4.24.85]
A1Q1_04377  protein kinase/endoribonuclease [KO:K08852] [EC:2.7.11.1 3.1.26.-]
A1Q1_04350  hypothetical protein [KO:K10661] [EC:2.3.2.27]
A1Q1_04601  ubiquitin conjugating enzyme [KO:K10578] [EC:2.3.2.23]
A1Q1_01825  hypothetical protein [KO:K04554] [EC:2.3.2.23]
A1Q1_01728  ubiquitin conjugating enzyme [KO:K10575] [EC:2.3.2.23]
A1Q1_05552  hypothetical protein [KO:K14022]
A1Q1_03441  hypothetical protein [KO:K10601] [EC:2.3.2.27]
A1Q1_02374  MMS2 protein [KO:K14026]
A1Q1_02534  ubiquitin-conjugating enzyme e2-16 kda [KO:K06689] [EC:2.3.2.23]
A1Q1_03354  ubiquitin-protein ligase [KO:K03347]
A1Q1_01005  ubiquitin-protein ligase [KO:K03094]
Compound
C00076  Calcium cation
G00009   
G00010   
G00011   
G00012   
G10694   
Reference
  Authors
Naidoo N
  Title
ER and aging-Protein folding and the ER stress response.
  Journal
Ageing Res Rev 8:150-9 (2009)
DOI:10.1016/j.arr.2009.03.001
Reference
  Authors
Malhotra JD, Kaufman RJ
  Title
The endoplasmic reticulum and the unfolded protein response.
  Journal
Semin Cell Dev Biol 18:716-31 (2007)
DOI:10.1016/j.semcdb.2007.09.003
Reference
  Authors
Maattanen P, Gehring K, Bergeron JJ, Thomas DY
  Title
Protein quality control in the ER: the recognition of misfolded proteins.
  Journal
Semin Cell Dev Biol 21:500-11 (2010)
DOI:10.1016/j.semcdb.2010.03.006
Reference
  Authors
Stolz A, Wolf DH
  Title
Endoplasmic reticulum associated protein degradation: a chaperone assisted journey to hell.
  Journal
Biochim Biophys Acta 1803:694-705 (2010)
DOI:10.1016/j.bbamcr.2010.02.005
Reference
  Authors
Dejgaard K, Theberge JF, Heath-Engel H, Chevet E, Tremblay ML, Thomas DY
  Title
Organization of the Sec61 translocon, studied by high resolution native electrophoresis.
  Journal
J Proteome Res 9:1763-71 (2010)
DOI:10.1021/pr900900x
Related
pathway
tasa00510  N-Glycan biosynthesis
tasa03050  Proteasome
tasa03060  Protein export
KO pathway
ko04141   
LinkDB

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