PATHWAY: tci01100 Help Entry tci01100                    Pathway                                 Name Metabolic pathways - Tatumella citrea Class BRITE hierarchy Pathway map tci01100   Metabolic pathways Module tci_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:tci01100] tci_M00002   Glycolysis, core module involving three-carbon compounds [PATH:tci01100] tci_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tci01100] tci_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:tci01100] tci_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:tci01100] tci_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:tci01100] tci_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tci01100] tci_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:tci01100] tci_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tci01100] tci_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:tci01100] tci_M00015   Proline biosynthesis, glutamate => proline [PATH:tci01100] tci_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:tci01100] tci_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:tci01100] tci_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:tci01100] tci_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:tci01100] tci_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:tci01100] tci_M00021   Cysteine biosynthesis, serine => cysteine [PATH:tci01100] tci_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:tci01100] tci_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:tci01100] tci_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:tci01100] tci_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:tci01100] tci_M00026   Histidine biosynthesis, PRPP => histidine [PATH:tci01100] tci_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:tci01100] tci_M00034   Methionine salvage pathway [PATH:tci01100] tci_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:tci01100] tci_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:tci01100] tci_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:tci01100] tci_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:tci01100] tci_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:tci01100] tci_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:tci01100] tci_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:tci01100] tci_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:tci01100] tci_M00063   CMP-KDO biosynthesis [PATH:tci01100] tci_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:tci01100] tci_M00082   Fatty acid biosynthesis, initiation [PATH:tci01100] tci_M00083   Fatty acid biosynthesis, elongation [PATH:tci01100] tci_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:tci01100] tci_M00087   beta-Oxidation [PATH:tci01100] tci_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:tci01100] tci_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:tci01100] tci_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:tci01100] tci_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:tci01100] tci_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:tci01100] tci_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:tci01100] tci_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:tci01100] tci_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:tci01100] tci_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:tci01100] tci_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:tci01100] tci_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:tci01100] tci_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:tci01100] tci_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:tci01100] tci_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:tci01100] tci_M00149   Succinate dehydrogenase, prokaryotes [PATH:tci01100] tci_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:tci01100] tci_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:tci01100] tci_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tci01100] tci_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:tci01100] tci_M00417   Cytochrome o ubiquinol oxidase [PATH:tci01100] tci_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:tci01100] tci_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:tci01100] tci_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:tci01100] tci_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:tci01100] tci_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:tci01100] tci_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:tci01100] tci_M00555   Betaine biosynthesis, choline => betaine [PATH:tci01100] tci_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:tci01100] tci_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:tci01100] tci_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:tci01100] tci_M00621   Glycine cleavage system [PATH:tci01100] tci_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:tci01100] tci_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:tci01100] tci_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:tci01100] tci_M00793   dTDP-L-rhamnose biosynthesis [PATH:tci01100] tci_M00844   Arginine biosynthesis, ornithine => arginine [PATH:tci01100] tci_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:tci01100] tci_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:tci01100] tci_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:tci01100] tci_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:tci01100] tci_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:tci01100] tci_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:tci01100] tci_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:tci01100] tci_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:tci01100] tci_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:tci01100] tci_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:tci01100] tci_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:tci01100] tci_M00970   Proline degradation, proline => glutamate [PATH:tci01100] Organism Tatumella citrea [GN:tci] Related pathway tci00010   Glycolysis / Gluconeogenesis tci00020   Citrate cycle (TCA cycle) tci00030   Pentose phosphate pathway tci00040   Pentose and glucuronate interconversions tci00051   Fructose and mannose metabolism tci00052   Galactose metabolism tci00053   Ascorbate and aldarate metabolism tci00061   Fatty acid biosynthesis tci00071   Fatty acid degradation tci00130   Ubiquinone and other terpenoid-quinone biosynthesis tci00190   Oxidative phosphorylation tci00220   Arginine biosynthesis tci00230   Purine metabolism tci00240   Pyrimidine metabolism tci00250   Alanine, aspartate and glutamate metabolism tci00260   Glycine, serine and threonine metabolism tci00261   Monobactam biosynthesis tci00270   Cysteine and methionine metabolism tci00280   Valine, leucine and isoleucine degradation tci00290   Valine, leucine and isoleucine biosynthesis tci00300   Lysine biosynthesis tci00310   Lysine degradation tci00330   Arginine and proline metabolism tci00332   Carbapenem biosynthesis tci00340   Histidine metabolism tci00350   Tyrosine metabolism tci00360   Phenylalanine metabolism tci00361   Chlorocyclohexane and chlorobenzene degradation tci00362   Benzoate degradation tci00364   Fluorobenzoate degradation tci00380   Tryptophan metabolism tci00400   Phenylalanine, tyrosine and tryptophan biosynthesis tci00401   Novobiocin biosynthesis tci00410   beta-Alanine metabolism tci00430   Taurine and hypotaurine metabolism tci00450   Selenocompound metabolism tci00460   Cyanoamino acid metabolism tci00470   D-Amino acid metabolism tci00480   Glutathione metabolism tci00500   Starch and sucrose metabolism tci00511   Other glycan degradation tci00520   Amino sugar and nucleotide sugar metabolism tci00521   Streptomycin biosynthesis tci00523   Polyketide sugar unit biosynthesis tci00525   Acarbose and validamycin biosynthesis tci00540   Lipopolysaccharide biosynthesis tci00541   O-Antigen nucleotide sugar biosynthesis tci00542   O-Antigen repeat unit biosynthesis tci00543   Exopolysaccharide biosynthesis tci00550   Peptidoglycan biosynthesis tci00552   Teichoic acid biosynthesis tci00561   Glycerolipid metabolism tci00562   Inositol phosphate metabolism tci00564   Glycerophospholipid metabolism tci00565   Ether lipid metabolism tci00592   alpha-Linolenic acid metabolism tci00600   Sphingolipid metabolism tci00620   Pyruvate metabolism tci00623   Toluene degradation tci00625   Chloroalkane and chloroalkene degradation tci00626   Naphthalene degradation tci00627   Aminobenzoate degradation tci00630   Glyoxylate and dicarboxylate metabolism tci00633   Nitrotoluene degradation tci00640   Propanoate metabolism tci00643   Styrene degradation tci00650   Butanoate metabolism tci00660   C5-Branched dibasic acid metabolism tci00670   One carbon pool by folate tci00680   Methane metabolism tci00710   Carbon fixation by Calvin cycle tci00720   Other carbon fixation pathways tci00730   Thiamine metabolism tci00740   Riboflavin metabolism tci00750   Vitamin B6 metabolism tci00760   Nicotinate and nicotinamide metabolism tci00770   Pantothenate and CoA biosynthesis tci00780   Biotin metabolism tci00785   Lipoic acid metabolism tci00790   Folate biosynthesis tci00791   Atrazine degradation tci00860   Porphyrin metabolism tci00900   Terpenoid backbone biosynthesis tci00907   Pinene, camphor and geraniol degradation tci00910   Nitrogen metabolism tci00920   Sulfur metabolism tci00930   Caprolactam degradation tci00946   Degradation of flavonoids tci00999   Biosynthesis of various plant secondary metabolites tci01040   Biosynthesis of unsaturated fatty acids tci01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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