Entry
Name
Endocytosis - Triticum dicoccoides (wild emmer wheat)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Triticum dicoccoides (wild emmer wheat) [GN:
tdc ]
Gene
119329044 senescence/dehydration-associated protein At3g51250-like [KO:K19366 ]
119285083 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like [KO:K19366 ]
119337368 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like [KO:K19366 ]
119365024 actin-related protein 2/3 complex subunit 2B-like isoform X1 [KO:K05758 ]
119355883 actin-related protein 2/3 complex subunit 2B-like isoform X1 [KO:K05758 ]
119330397 stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283 ]
119300668 stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283 ]
119308063 stromal 70 kDa heat shock-related protein, chloroplastic-like [KO:K03283 ]
119291697 vacuolar protein-sorting-associated protein 37 homolog 1-like isoform X1 [KO:K12185 ]
119284493 vacuolar protein-sorting-associated protein 37 homolog 1-like isoform X1 [KO:K12185 ]
119311234 vacuolar protein sorting-associated protein 22 homolog 1-like [KO:K12188 ]
119302560 vacuolar protein sorting-associated protein 22 homolog 1-like [KO:K12188 ]
119278990 vacuolar protein sorting-associated protein 25-like isoform X1 [KO:K12189 ]
119316991 vacuolar protein sorting-associated protein 20 homolog 2-like [KO:K12195 ]
119324097 vacuolar protein sorting-associated protein 20 homolog 2-like [KO:K12195 ]
119354401 vacuolar protein sorting-associated protein 32 homolog 1-like [KO:K12194 ]
119300920 vacuolar protein sorting-associated protein 32 homolog 2-like [KO:K12194 ]
119301174 vacuolar protein sorting-associated protein 32 homolog 2-like [KO:K12194 ]
119336739 vacuolar protein sorting-associated protein 32 homolog 2-like [KO:K12194 ]
119308439 vacuolar protein sorting-associated protein 32 homolog 2-like [KO:K12194 ]
119308713 vacuolar protein sorting-associated protein 32 homolog 2 [KO:K12194 ]
119292291 vacuolar protein sorting-associated protein 24 homolog 1-like [KO:K12193 ]
119304358 vacuolar protein sorting-associated protein 24 homolog 1-like [KO:K12193 ]
119311716 vacuolar protein sorting-associated protein 2 homolog 2-like [KO:K12191 ]
119295726 vacuolar protein sorting-associated protein 2 homolog 1 [KO:K12191 ]
119286076 vacuolar protein sorting-associated protein 2 homolog 1-like [KO:K12191 ]
119303035 vacuolar protein sorting-associated protein 2 homolog 2-like [KO:K12191 ]
119268902 vacuolar protein sorting-associated protein 2 homolog 3-like [KO:K12192 ]
119321290 vacuolar protein sorting-associated protein 2 homolog 3-like [KO:K12192 ]
119315381 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like [KO:K12196 ]
119325245 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like [KO:K12196 ]
119274602 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like [KO:K12196 ]
119335800 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [KO:K12199 ]
119315131 vacuolar protein sorting-associated protein 60.1-like [KO:K12198 ]
119267019 vacuolar protein sorting-associated protein 60.1-like [KO:K12198 ]
119357717 vacuolar protein sorting-associated protein 60.1-like [KO:K12198 ]
119357779 vacuolar protein sorting-associated protein 60.1-like [KO:K12198 ]
119274829 vacuolar protein sorting-associated protein 60.1-like [KO:K12198 ]
119363876 vacuolar protein sorting-associated protein 45 homolog [KO:K12479 ]
119354740 vacuolar protein sorting-associated protein 45 homolog [KO:K12479 ]
119344450 ADP-ribosylation factor GTPase-activating protein AGD12-like isoform X1 [KO:K12486 ]
119277589 probable ADP-ribosylation factor GTPase-activating protein AGD11 [KO:K12486 ]
119278656 probable ADP-ribosylation factor GTPase-activating protein AGD11 [KO:K12486 ]
119316408 ADP-ribosylation factor GTPase-activating protein AGD12-like [KO:K12486 ]
119317697 ADP-ribosylation factor GTPase-activating protein AGD12-like [KO:K12486 ]
119354129 ADP-ribosylation factor GTPase-activating protein AGD5-like [KO:K12486 ]
119322130 ADP-ribosylation factor GTPase-activating protein AGD12-like [KO:K12486 ]
119270510 probable ADP-ribosylation factor GTPase-activating protein AGD11 [KO:K12486 ]
119341435 probable ADP-ribosylation factor GTPase-activating protein AGD11 [KO:K12486 ]
119363313 ADP-ribosylation factor GTPase-activating protein AGD5-like [KO:K12486 ]
119311068 ADP-ribosylation factor GTPase-activating protein AGD3-like [KO:K12489 ]
119329287 ADP-ribosylation factor GTPase-activating protein AGD3-like [KO:K12489 ]
119317198 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X1 [KO:K12489 ]
119302247 ADP-ribosylation factor GTPase-activating protein AGD3-like [KO:K12489 ]
119337134 ADP-ribosylation factor GTPase-activating protein AGD3-like [KO:K12489 ]
119322206 ADP-ribosylation factor GTPase-activating protein AGD2-like isoform X1 [KO:K12489 ]
119285297 probable ADP-ribosylation factor GTPase-activating protein AGD6 [KO:K12492 ]
119290800 probable ADP-ribosylation factor GTPase-activating protein AGD6 [KO:K12492 ]
119310728 probable ADP-ribosylation factor GTPase-activating protein AGD9 [KO:K12493 ]
119337387 probable ADP-ribosylation factor GTPase-activating protein AGD8 [KO:K12493 ]
119287314 probable ADP-ribosylation factor GTPase-activating protein AGD9 [KO:K12493 ]
119273084 probable ADP-ribosylation factor GTPase-activating protein AGD8 [KO:K12493 ]
119316496 brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [KO:K18442 ]
119333664 brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [KO:K18442 ]
119283424 brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [KO:K18442 ]
119322365 brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [KO:K18442 ]
119339097 brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [KO:K18442 ]
119291000 brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [KO:K18442 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
tdc04070 Phosphatidylinositol signaling system
tdc04130 SNARE interactions in vesicular transport
KO pathway
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