KEGG   PATHWAY: thi03440
Entry
thi03440                    Pathway                                
Name
Homologous recombination - Thiomonas arsenitoxydans
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
thi03440  Homologous recombination
thi03440

Other DBs
GO: 0000724
Organism
Thiomonas arsenitoxydans [GN:thi]
Gene
THI_1145  recJ; Single-stranded-DNA-specific exonuclease recJ [KO:K07462] [EC:3.1.-.-]
THI_0087  ssb; Single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) [KO:K03111]
THI_p0033  ssb; Single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein) [KO:K03111]
THI_2767  putative DNA repair protein recO (Recombination protein O) [KO:K03584]
THI_2289  recR; Recombination protein recR [KO:K06187]
THI_1042  recA; Protein recA (Recombinase A) [KO:K03553]
THI_1572  polA; DNA polymerase I (POL I) [KO:K02335] [EC:2.7.7.7]
THI_3250  ruvA; Holliday junction ATP-dependent DNA helicase ruvA [KO:K03550]
THI_0264  ruvB; Holliday junction ATP-dependent DNA helicase ruvB [KO:K03551] [EC:5.6.2.4]
THI_3259  ruvC; Crossover junction endodeoxyribonuclease ruvC (Holliday junction nuclease ruvC) (Holliday juction resolvase ruvC) [KO:K01159] [EC:3.1.21.10]
THI_0862  recG; ATP-dependent DNA helicase recG [KO:K03655] [EC:5.6.2.4]
THI_3190  putative exodeoxyribonuclease V, beta subunit recB [KO:K03582] [EC:3.1.11.5]
THI_3189  putative exodeoxyribonuclease V, gamma subunit recC [KO:K03583] [EC:3.1.11.5]
THI_3191  putative exodeoxyribonuclease V, alpha subunit recD [KO:K03581] [EC:3.1.11.5]
THI_2829  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
THI_0002  dnaN; DNA polymerase III, beta subunit [KO:K02338] [EC:2.7.7.7]
THI_2291  putative DNA polymerase III subunit tau [Contains: DNA polymerase III subunit gamma] (DnaX) [KO:K02343] [EC:2.7.7.7]
THI_0168  putative DNA polymerase III, delta subunit [KO:K02340] [EC:2.7.7.7]
THI_1879  putative DNA-directed DNA polymerase [KO:K02341] [EC:2.7.7.7]
THI_1346  putative protein fusion of DNA polymerase III, epsilon subunit and Excinuclease ABC, C subunit [KO:K02342] [EC:2.7.7.7]
THI_1689  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
THI_2980  putative DNA polymerase III chi subunit, HolC [KO:K02339] [EC:2.7.7.7]
THI_3746  putative Primosomal protein N' [KO:K04066] [EC:5.6.2.4]
THI_2450  putative Primosomal replication protein n (PriB) [KO:K02686]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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