PATHWAY: vag02010 Help
Entry Name ABC transporters - Vibrio alginolyticus
Description The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class Environmental Information Processing; Membrane transportBRITE hierarchy
Pathway map Ortholog table Other DBs Organism Vibrio alginolyticus [GN:
vag ]
Gene N646_4316 molybdenum ABC transporter, periplasmic molybdenum-binding protein [KO:K02020 ]
N646_3670 putative 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component [KO:K02012 ]
N646_2505 thiamin ABC transporter, periplasmic thiamin-binding protein [KO:K02064 ]
N646_0575 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
N646_0576 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
N646_3784 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
N646_0577 spermidine/putrescine ABC transporter membrane protein [KO:K11070 ]
N646_0578 spermidine/putrescine ABC transporter membrane protein [KO:K11071 ]
N646_0436 ABC superfamily (glycine/betaine/proline transport protein) [KO:K02002 ]
N646_3117 maltose/maltodextrin ABC transporter, ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
N646_4091 ribose ABC transporter, periplasmic D-ribose-binding protein [KO:K10439 ]
N646_3180 phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
N646_2726 putative phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
N646_4557 ABC transporter, periplasmic substrate-binding protein [KO:K02040 ]
N646_4487 arginine ABC transporter, periplasmic arginine-binding protein [KO:K09997 ]
N646_4486 ABC-type arginine transport system, permease component [KO:K09999 ]
N646_0645 amino acid ABC transporter, periplasmic amino acid-binding protein [KO:K09969 ]
N646_2188 amino acid ABC transporter, periplasmic amino acid-binding portion [KO:K16961 ]
N646_0063 amino acid ABC transporter, periplasmic amino acid-binding protein [KO:K10022 ]
N646_4027 putative high-affinity branched-chain amino acid transport permease protein [KO:K01998 ]
N646_4024 putative high-affinity branched-chain amino acid transport ATP-binding protein [KO:K01995 ]
N646_4029 putative high-affinity branched-chain amino acid transport ATP-binding protein [KO:K01996 ]
N646_0381 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [KO:K15580 ]
N646_1166 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [KO:K15580 ]
N646_3452 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [KO:K15580 ]
N646_1165 oligopeptide permease ABC transporter membrane protein [KO:K15581 ]
N646_0219 peptide ABC transporter, periplasmic peptide-binding protein [KO:K19226 ]
N646_2362 ABC-type oligopeptide transport system, periplasmic component [KO:K13893 ]
N646_0831 ferric enterobactin transport system permease protein fepD [KO:K23186 ]
N646_0832 ferric enterobactin transport system permease protein fepG [KO:K23187 ]
N646_3159 iron(III) ABC transporter, periplasmic iron-compound-binding protein [KO:K23227 ]
N646_3005 zinc ABC transporter, periplasmic zinc-binding protein [KO:K09815 ]
N646_3660 macrolide-specific ABC-type efflux carrier [KO:K05685 ] [EC:7.6.2.-]
Compound C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference Authors Tomii K, Kanehisa M.
Title A comparative analysis of ABC transporters in complete microbial genomes.
Journal Reference Authors Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal Reference Authors Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal Reference Authors Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal Reference Authors Quintero MJ, Montesinos ML, Herrero A, Flores E
Title Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal Reference Authors Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal Reference Authors Valladares A, Montesinos ML, Herrero A, Flores E.
Title An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal Reference Authors Richard-Fogal CL, Frawley ER, Kranz RG
Title Topology and function of CcmD in cytochrome c maturation.
Journal Reference Authors Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal Reference Authors Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal Reference Authors Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal Reference Authors Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal KO pathway LinkDB All DBs
