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Entry
Name
ABC transporters - Vibrio cholerae O1 O395
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
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Pathway map
Ortholog table
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Organism
Vibrio cholerae O1 O395 [GN:
vcr ]
Gene
VC395_0555 cysP; thiosulfate ABC transporter, periplasmic thiosulfate-binding protein [KO:K02048 ]
VC395_A0586 modA; molybdenum ABC transporter, periplasmic molybdenum-binding protein [KO:K02020 ]
VC395_A0627 iron(III) ABC transporter, periplasmic iron-compound-binding protein [KO:K02012 ]
VC395_0625 fbpA; iron(III) ABC transporter, periplasmic iron-compound-binding protein [KO:K02012 ]
VC395_2652 tbpA; thiamin ABC transporter, periplasmic thiamin-binding protein [KO:K02064 ]
VC395_1544 potD-1; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
VC395_1545 potD-2; spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
VC395_0721 putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
VC395_A1133 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
VC395_1546 potC; spermidine/putrescine ABC transporter, permease protein [KO:K11070 ]
VC395_1547 potB; spermidine/putrescine ABC transporter, permease protein [KO:K11071 ]
VC395_A0970 malE; maltose ABC transporter, periplasmic maltose-binding protein [KO:K10108 ]
VC395_A0971 malK; maltose/maltodextrin ABC transporter, ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
VC395_A0123 rbsB; ribose ABC transporter, periplasmic D-ribose-binding protein [KO:K10439 ]
VC395_1444 mglB; galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein [KO:K10540 ]
VC395_1666 ugpB; glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein [KO:K05813 ]
VC395_1667 ugpA; glycerol-3-phosphate ABC transporter, permease protein [KO:K05814 ]
VC395_1668 ugpE; glycerol-3-phosphate ABC transporter, permease protein [KO:K05815 ]
VC395_A0063 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
VC395_0738 putative phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
VC395_A0555 artI; arginine ABC transporter, periplasmic arginine-binding protein [KO:K09997 ]
VC395_1481 amino acid ABC transporter, periplasmic amino acid-binding protein [KO:K09969 ]
VC395_0170 amino acid ABC transporter, periplasmic amino acid-binding portion [KO:K16961 ]
VC395_1978 amino acid ABC transporter, periplasmic amino acid-binding protein [KO:K10022 ]
VC395_1106 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [KO:K15580 ]
VC395_1798 sapA; peptide ABC transporter, periplasmic peptide-binding protein [KO:K19226 ]
VC395_A0723 putative peptide ABC transporter, periplasmic peptide-binding protein [KO:K13893 ]
VC395_0793 viuP; vibriobactin and enterobactin ABC transporter, periplasmic ferric vibriobactin/enterobactin-binding protein [KO:K23185 ]
VC395_0794 viuD; vibriobactin and enterobactin ABC transporter, permease protein [KO:K23186 ]
VC395_0795 viuG; vibriobactin and enterobactin ABC transporter, permease protein [KO:K23187 ]
VC395_0234 fhuC; iron(III) ABC transporter, periplasmic iron-compound-binding protein [KO:K23227 ]
VC395_2196 znuA; zinc ABC transporter, periplasmic zinc-binding protein [KO:K09815 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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