KEGG   PATHWAY: yey02010
Entry
yey02010                    Pathway                                
Name
ABC transporters - Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
yey02010  ABC transporters
yey02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3) [GN:yey]
Gene
Y11_00611  [KO:K02048]
Y11_00621  [KO:K02046]
Y11_00631  [KO:K02047]
Y11_00641  [KO:K02045] [EC:7.3.2.3]
Y11_00661  [KO:K05685] [EC:7.6.2.-]
Y11_01051  [KO:K02010] [EC:7.2.2.7]
Y11_01061  [KO:K02011]
Y11_01071  [KO:K02012]
Y11_01131  [KO:K02066]
Y11_01141  [KO:K02065]
Y11_01151  [KO:K02067]
Y11_01301  [KO:K02193] [EC:7.6.2.5]
Y11_01311  [KO:K02194]
Y11_01331  [KO:K02195]
Y11_01341  [KO:K02196]
Y11_01871  [KO:K10014]
Y11_01881  [KO:K10016]
Y11_01891  [KO:K10015]
Y11_01901  [KO:K10017] [EC:7.4.2.1]
Y11_03031  [KO:K13896]
Y11_03041  [KO:K13895]
Y11_03051  [KO:K13894]
Y11_03061  [KO:K13893]
Y11_03471  [KO:K02073]
Y11_03481  [KO:K02071]
Y11_03491  [KO:K02072]
Y11_03641  [KO:K11073]
Y11_03661  [KO:K11076] [EC:7.6.2.16]
Y11_03671  [KO:K11075]
Y11_03681  [KO:K11074]
Y11_03721  [KO:K09996]
Y11_03741  [KO:K09998]
Y11_03751  [KO:K09999]
Y11_03761  [KO:K09997]
Y11_03771  [KO:K10000] [EC:7.4.2.1]
Y11_03901  [KO:K05685] [EC:7.6.2.-]
Y11_03961  [KO:K16012]
Y11_03971  [KO:K16013]
Y11_04241  [KO:K11085] [EC:7.5.2.6]
Y11_05381  [KO:K13409]
Y11_05531  [KO:K09808]
Y11_05541  [KO:K09810] [EC:7.6.2.-]
Y11_05551  [KO:K09808]
Y11_07531  [KO:K10192]
Y11_07541  [KO:K10195]
Y11_07551  [KO:K10194]
Y11_07561  [KO:K10193]
Y11_07701  [KO:K11606]
Y11_07711  [KO:K11605]
Y11_07721  [KO:K11607]
Y11_07731  [KO:K11604]
Y11_07951  [KO:K06073]
Y11_07971  [KO:K06074] [EC:7.6.2.8]
Y11_08621  [KO:K19230]
Y11_08631  [KO:K19229]
Y11_08641  [KO:K19228]
Y11_08651  [KO:K19227]
Y11_08661  [KO:K19226]
Y11_08821  [KO:K15580]
Y11_09511  [KO:K10015]
Y11_10071  [KO:K10538]
Y11_10091  [KO:K10539] [EC:7.5.2.12]
Y11_10101  [KO:K10537]
Y11_10951  [KO:K10823]
Y11_10961  [KO:K15583]
Y11_10971  [KO:K15582]
Y11_10981  [KO:K15581]
Y11_10991  [KO:K15580]
Y11_11001  [KO:K15580]
Y11_11781  [KO:K09815]
Y11_11791  [KO:K09817] [EC:7.2.2.20]
Y11_11801  [KO:K09816]
Y11_13941  [KO:K10010] [EC:7.4.2.1]
Y11_13951  [KO:K10009]
Y11_13961  [KO:K02424]
Y11_15431  [KO:K02012]
Y11_15441  [KO:K02011]
Y11_15451  [KO:K02010] [EC:7.2.2.7]
Y11_15951  [KO:K02006]
Y11_15961  [KO:K02008]
Y11_15971  [KO:K02009]
Y11_15991  [KO:K02007]
Y11_16741  [KO:K09691] [EC:7.5.2.14]
Y11_16751  [KO:K09690]
Y11_17151  [KO:K10541]
Y11_17161  [KO:K10542] [EC:7.5.2.11]
Y11_17171  [KO:K10540]
Y11_17501  [KO:K10036]
Y11_17511  [KO:K10037]
Y11_17521  [KO:K10038] [EC:7.4.2.1]
Y11_17721  [KO:K05846]
Y11_17731  [KO:K05847] [EC:7.6.2.9]
Y11_17741  [KO:K05846]
Y11_17751  [KO:K05845]
Y11_17791  [KO:K11963]
Y11_17801  [KO:K11962]
Y11_17811  [KO:K11961]
Y11_17821  [KO:K11960]
Y11_17831  [KO:K11959]
Y11_17851  [KO:K02042]
Y11_17861  [KO:K02042]
Y11_17871  [KO:K02044]
Y11_17881  [KO:K02041] [EC:7.3.2.2]
Y11_18141  [KO:K11963]
Y11_18221  [KO:K02017] [EC:7.3.2.5]
Y11_18231  [KO:K02018]
Y11_18241  [KO:K02020]
Y11_18251  [KO:K02020]
Y11_18291  [KO:K05776]
Y11_19121  [KO:K10001]
Y11_19131  [KO:K10003]
Y11_19141  [KO:K10002]
Y11_19151  [KO:K10004] [EC:7.4.2.1]
Y11_19411  [KO:K24821]
Y11_20401  [KO:K18890]
Y11_20411  [KO:K18889]
Y11_21011  [KO:K02040]
Y11_22281  [KO:K11959]
Y11_22291  [KO:K11960]
Y11_22301  [KO:K11961]
Y11_22311  [KO:K11962]
Y11_22321  [KO:K11963]
Y11_22341  [KO:K01999]
Y11_22551  [KO:K05685] [EC:7.6.2.-]
Y11_26391  [KO:K07122]
Y11_26401  [KO:K07323]
Y11_26411  [KO:K02067]
Y11_26421  [KO:K02066]
Y11_26431  [KO:K02065]
Y11_26491  [KO:K06861] [EC:7.5.2.5]
Y11_27371  [KO:K09969]
Y11_27381  [KO:K09970]
Y11_27391  [KO:K09971]
Y11_27401  [KO:K09972] [EC:7.4.2.1]
Y11_27711  [KO:K10111] [EC:7.5.2.-]
Y11_27721  [KO:K10108]
Y11_27731  [KO:K10109]
Y11_27741  [KO:K10110]
Y11_28001  [KO:K12536]
Y11_28381  [KO:K23163]
Y11_29541  [KO:K10439]
Y11_29551  [KO:K10440]
Y11_29561  [KO:K10441] [EC:7.5.2.7]
Y11_29571  [KO:K06726] [EC:5.4.99.62]
Y11_29791  [KO:K02040]
Y11_29801  [KO:K02037]
Y11_29811  [KO:K02038]
Y11_29821  [KO:K02036] [EC:7.3.2.1]
Y11_29961  [KO:K02072]
Y11_29971  [KO:K02071]
Y11_29981  [KO:K02073]
Y11_30611  [KO:K10543]
Y11_30621  [KO:K10545] [EC:7.5.2.10]
Y11_30631  [KO:K10544]
Y11_31101  [KO:K12368]
Y11_31111  [KO:K12369]
Y11_31121  [KO:K12370]
Y11_31131  [KO:K12371]
Y11_31141  [KO:K12372]
Y11_32641  [KO:K15551]
Y11_32651  [KO:K10831] [EC:7.6.2.7]
Y11_32661  [KO:K15552]
Y11_33331  [KO:K23508]
Y11_33341  [KO:K10820] [EC:7.5.2.9]
Y11_33351  [KO:K23509]
Y11_33361  [KO:K23509]
Y11_34261  [KO:K09812]
Y11_34271  [KO:K09811]
Y11_34321  [KO:K01999]
Y11_34331  [KO:K01997]
Y11_34341  [KO:K01998]
Y11_34351  [KO:K01995]
Y11_34361  [KO:K01996]
Y11_34441  [KO:K05813]
Y11_34461  [KO:K05814]
Y11_34471  [KO:K05815]
Y11_34481  [KO:K05816] [EC:7.6.2.10]
Y11_35591  [KO:K02471]
Y11_36961  [KO:K10112] [EC:7.5.2.-]
Y11_37351  [KO:K07091]
Y11_37361  [KO:K11720]
Y11_37591  [KO:K10555]
Y11_37601  [KO:K10557]
Y11_37611  [KO:K10556]
Y11_37621  [KO:K10558]
Y11_38701  [KO:K02062] [EC:7.6.2.15]
Y11_38711  [KO:K02063]
Y11_38721  [KO:K02064]
Y11_39621  [KO:K10829] [EC:7.2.2.16]
Y11_39631  [KO:K23227]
Y11_39641  [KO:K23228]
Y11_39721  [KO:K06858]
Y11_41321  [KO:K02073]
Y11_41331  [KO:K02072]
Y11_41341  [KO:K02071]
Y11_41511  [KO:K02002]
Y11_41521  [KO:K02001]
Y11_41531  [KO:K02000] [EC:7.6.2.9]
Y11_43361  [KO:K02036] [EC:7.3.2.1]
Y11_43371  [KO:K02038]
Y11_43381  [KO:K02037]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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