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Entry
Name
ABC transporters - Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
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Pathway map
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Organism
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3) [GN:
yey ]
Gene
Y11_18241 molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA [KO:K02020 ]
Y11_18251 molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA [KO:K02020 ]
Y11_18291 putative molybdenum transport ATP-binding protein modF [KO:K05776 ]
Y11_03641 putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
Y11_41511 L-proline glycine betaine binding ABC transporter protein ProX [KO:K02002 ]
Y11_41521 L-proline glycine betaine ABC transport system permease protein ProW [KO:K02001 ]
Y11_17721 osmoprotectant ABC transporter inner membrane protein YehW [KO:K05846 ]
Y11_27721 maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE [KO:K10108 ]
Y11_27731 maltose/maltodextrin ABC transporter, permease protein MalF [KO:K10109 ]
Y11_27741 maltose/maltodextrin ABC transporter, permease protein MalG [KO:K10110 ]
Y11_27711 maltose/maltodextrin transport ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
Y11_36961 maltose/maltodextrin transport ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
Y11_26401 uncharacterized ABC transporter, auxiliary component YrbC [KO:K07323 ]
Y11_26411 uncharacterized ABC transporter, periplasmic component YrbD [KO:K02067 ]
Y11_01151 ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C [KO:K02067 ]
Y11_26421 uncharacterized ABC transporter, permease component YrbE [KO:K02066 ]
Y11_01131 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A [KO:K02066 ]
Y11_26431 uncharacterized ABC transporter, ATP-binding protein YrbF [KO:K02065 ]
Y11_29541 ribose ABC transport system, periplasmic ribose-binding protein RbsB [KO:K10439 ]
Y11_10101 L-arabinose-binding periplasmic protein precursor AraF [KO:K10537 ]
Y11_33331 putative sugar ABC transport system, periplasmic binding protein YtfQ precursor [KO:K23508 ]
Y11_33361 putative sugar ABC transport system, permease protein YjfF [KO:K23509 ]
Y11_33351 putative sugar ABC transport system, permease protein YtfT [KO:K23509 ]
Y11_17171 galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB [KO:K10540 ]
Y11_17151 galactose/methyl galactoside ABC transport system, permease protein MglC [KO:K10541 ]
Y11_30611 xylose ABC transporter, periplasmic xylose-binding protein XylF [KO:K10543 ]
Y11_34441 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein [KO:K05813 ]
Y11_34461 sn-glycerol-3-phosphate transport system permease protein UgpA [KO:K05814 ]
Y11_34471 sn-glycerol-3-phosphate transport system permease protein UgpE [KO:K05815 ]
Y11_21011 phosphate ABC transporter, periplasmic phosphate-binding protein PstS [KO:K02040 ]
Y11_29791 phosphate ABC transporter, periplasmic phosphate-binding protein PstS [KO:K02040 ]
Y11_17871 phosphonate ABC transporter phosphate-binding periplasmic component [KO:K02044 ]
Y11_01871 histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ [KO:K10014 ]
Y11_17501 glutamine ABC transporter, periplasmic glutamine-binding protein [KO:K10036 ]
Y11_03721 arginine ABC transporter, periplasmic arginine-binding protein ArtJ [KO:K09996 ]
Y11_03761 arginine ABC transporter, periplasmic arginine-binding protein ArtI [KO:K09997 ]
Y11_19121 glutamate Aspartate periplasmic binding protein precursor GltI [KO:K10001 ]
Y11_19141 glutamate Aspartate transport system permease protein GltK [KO:K10002 ]
Y11_19131 glutamate Aspartate transport system permease protein GltJ [KO:K10003 ]
Y11_27371 glutamate Aspartate periplasmic binding protein precursor GltI [KO:K09969 ]
Y11_27381 glutamate aspartate transport system permease protein GltJ [KO:K09970 ]
Y11_27391 glutamate aspartate transport system permease protein GltK [KO:K09971 ]
Y11_13961 cystine ABC transporter, periplasmic cystine-binding protein FliY [KO:K02424 ]
Y11_34321 high-affinity leucine-specific transport system,periplasmic binding protein LivK [KO:K01999 ]
Y11_34331 high-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
Y11_34341 branched-chain amino acid transport system permease protein LivM [KO:K01998 ]
Y11_34351 branched-chain amino acid transport ATP-binding protein LivG [KO:K01995 ]
Y11_34361 branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
Y11_11001 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA [KO:K15580 ]
Y11_31101 dipeptide-binding ABC transporter, periplasmic substrate-binding component [KO:K12368 ]
Y11_03061 ABC transporter, periplasmic substrate-binding protein [KO:K13893 ]
Y11_39721 vitamin B12 ABC transporter, B12-binding component BtuF [KO:K06858 ]
Y11_11781 zinc ABC transporter, periplasmic-binding protein ZnuA [KO:K09815 ]
Y11_11801 zinc ABC transporter, inner membrane permease protein ZnuB [KO:K09816 ]
Y11_07731 manganese ABC transporter, periplasmic-binding protein SitA [KO:K11604 ]
Y11_07711 manganese ABC transporter, inner membrane permease protein SitC [KO:K11605 ]
Y11_07701 manganese ABC transporter, inner membrane permease protein SitD [KO:K11606 ]
Y11_15971 additional substrate-specific component CbiN of cobalt ECF transporter [KO:K02009 ]
Y11_15991 substrate-specific component CbiM of cobalt ECF transporter [KO:K02007 ]
Y11_15961 transmembrane component CbiQ of energizing module of cobalt ECF transporter [KO:K02008 ]
Y11_15951 ATPase component CbiO of energizing module of cobalt ECF transporter [KO:K02006 ]
Y11_37591 autoinducer 2 (AI-2) ABC transport system,periplasmic AI-2 binding protein LsrB [KO:K10555 ]
Y11_37611 autoinducer 2 (AI-2) ABC transport system,membrane channel protein LsrC [KO:K10556 ]
Y11_37601 autoinducer 2 (AI-2) ABC transport system,membrane channel protein LsrD [KO:K10557 ]
Y11_37621 autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component [KO:K10558 ]
Y11_05531 lipoprotein releasing system transmembrane protein LolC [KO:K09808 ]
Y11_05551 lipoprotein releasing system transmembrane protein LolE [KO:K09808 ]
Y11_05541 lipoprotein releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
Y11_01341 cytochrome c-type biogenesis protein CcmD,interacts with CcmCE [KO:K02196 ]
Y11_01331 cytochrome c-type biogenesis protein CcmC,putative heme lyase for CcmE [KO:K02195 ]
Y11_01311 ABC transporter involved in cytochrome c biogenesis, CcmB subunit [KO:K02194 ]
Y11_05381 putative microcin H47 secretion ATP-binding protein mchF [KO:K13409 ]
Y11_28001 ABC exporter for hemopore HasA, ATP-binding component HasD [KO:K12536 ]
Y11_00661 macrolide export ATP-binding/permease protein MacB [KO:K05685 ] [EC:7.6.2.-]
Y11_22551 macrolide export ATP-binding/permease protein MacB [KO:K05685 ] [EC:7.6.2.-]
Y11_03901 putative ABC transporter ATP-binding protein [KO:K05685 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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