KEGG   PATHWAY: ztr03030
Entry
ztr03030                    Pathway                                
Name
DNA replication - Zymoseptoria tritici
Description
A complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (DnaB or MCM complex) precedes the DNA synthetic machinery and unwinds the duplex parental DNA in cooperation with the SSB or RPA. On the leading strand, replication occurs continuously in a 5 to 3 direction, whereas on the lagging strand, DNA replication occurs discontinuously by synthesis and joining of short Okazaki fragments. In prokaryotes, the leading strand replication apparatus consists of a DNA polymerase (pol III core), a sliding clamp (beta), and a clamp loader (gamma delta complex). The DNA primase (DnaG) is needed to form RNA primers. Normally, during replication of the lagging-strand DNA template, an RNA primer is removed either by an RNase H or by the 5 to 3 exonuclease activity of DNA pol I, and the DNA ligase joins the Okazaki fragments. In eukaryotes, three DNA polymerases (alpha, delta, and epsilon) have been identified. DNA primase forms a permanent complex with DNA polymerase alpha. PCNA and RFC function as a clamp and a clamp loader. FEN 1 and RNase H1 remove the RNA from the Okazaki fragments and DNA ligase I joins the DNA.
Class
Genetic Information Processing; Replication and repair
Pathway map
ztr03030  DNA replication
ztr03030

Organism
Zymoseptoria tritici [GN:ztr]
Gene
MYCGRDRAFT_41575  hypothetical protein [KO:K03469] [EC:3.1.26.4]
MYCGRDRAFT_109907  hypothetical protein [KO:K07466]
MYCGRDRAFT_100061  hypothetical protein [KO:K04802]
MYCGRDRAFT_100567  hypothetical protein [KO:K04799] [EC:3.1.-.-]
MYCGRDRAFT_31749  hypothetical protein [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
MYCGRDRAFT_99627  hypothetical protein [KO:K02320] [EC:2.7.7.7]
MYCGRDRAFT_91224  hypothetical protein [KO:K02321]
MYCGRDRAFT_44260  hypothetical protein [KO:K02684] [EC:2.7.7.102]
MYCGRDRAFT_71246  DNA primase [KO:K02685]
MYCGRDRAFT_35747  DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
MYCGRDRAFT_45479  hypothetical protein [KO:K02328]
MYCGRDRAFT_87430  hypothetical protein [KO:K03504]
MYCGRDRAFT_47547  hypothetical protein [KO:K03505]
MYCGRDRAFT_76789  hypothetical protein [KO:K02324] [EC:2.7.7.7]
MYCGRDRAFT_86683  hypothetical protein [KO:K02325] [EC:2.7.7.7]
MYCGRDRAFT_94100  DNA replication licensing factor MCM2 [KO:K02540] [EC:5.6.2.3]
MYCGRDRAFT_48745  DNA replication licensing factor mcm3 [KO:K02541] [EC:5.6.2.3]
MYCGRDRAFT_43403  hypothetical protein [KO:K02212] [EC:5.6.2.3]
MYCGRDRAFT_46995  hypothetical protein [KO:K02209] [EC:5.6.2.3]
MYCGRDRAFT_47838  DNA replication licensing factor MCM6 [KO:K02542] [EC:5.6.2.3]
MYCGRDRAFT_74015  DNA replication licensing factor MCM7 [KO:K02210] [EC:5.6.2.3]
MYCGRDRAFT_95717  hypothetical protein [KO:K10739]
MYCGRDRAFT_108196  hypothetical protein [KO:K10740]
MYCGRDRAFT_32502  hypothetical protein [KO:K10754]
MYCGRDRAFT_100072  replication factor C subunit 2 [KO:K10755]
MYCGRDRAFT_76271  replication factor C subunit 4 [KO:K10755]
MYCGRDRAFT_110326  hypothetical protein [KO:K10756]
MYCGRDRAFT_85700  replication factor C subunit 5 [KO:K10756]
MYCGRDRAFT_68089  hypothetical protein [KO:K10743] [EC:3.1.26.4]
Reference
PMID:8087839
  Authors
Stillman B.
  Title
Smart machines at the DNA replication fork.
  Journal
Cell 78:725-8 (1994)
DOI:10.1016/S0092-8674(94)90362-X
Reference
PMID:9759502
  Authors
Waga S, Stillman B.
  Title
The DNA replication fork in eukaryotic cells.
  Journal
Annu Rev Biochem 67:721-51 (1998)
DOI:10.1146/annurev.biochem.67.1.721
KO pathway
ko03030   
LinkDB

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