KEGG   PATHWAY: pcoq03050
Entry
pcoq03050                   Pathway                                
Name
Proteasome - Propithecus coquereli (Coquerel's sifaka)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
pcoq03050  Proteasome
pcoq03050

Other DBs
GO: 0000502
Organism
Propithecus coquereli (Coquerel's sifaka) [GN:pcoq]
Gene
105804976  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
105806589  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
105807577  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
105808189  PSMA8; proteasome subunit alpha type-7-like [KO:K02731] [EC:3.4.25.1]
105808396  IFNG; interferon gamma [KO:K04687]
105808490  POMP; proteasome maturation protein [KO:K11599]
105808623  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
105811066  PSMC3; 26S protease regulatory subunit 6A [KO:K03065]
105812491  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
105812739  PSME2; proteasome activator complex subunit 2 [KO:K06697]
105812740  PSME1; proteasome activator complex subunit 1 [KO:K06696]
105813564  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
105813718  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
105814317  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
105814447  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
105814731  [KO:K02730] [EC:3.4.25.1]
105814760  PSME4; proteasome activator complex subunit 4 [KO:K06699]
105815191  PSMC2; 26S protease regulatory subunit 7 [KO:K03061]
105816458  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
105816545  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
105816719  PSMD1; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
105817257  [KO:K03030]
105818236  PSMA1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
105818541  ADRM1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
105818550  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
105819542  PSMD14; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
105820208  PSME3; proteasome activator complex subunit 3 [KO:K06698]
105820430  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
105820583  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
105820609  PSMC4; 26S protease regulatory subunit 6B [KO:K03063]
105821498  PSMA6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
105821892  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
105821915  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
105822336  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
105822845  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
105823339  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
105823416  PSMB10; proteasome subunit beta type-10 [KO:K02733] [EC:3.4.25.1]
105823955  PSMC5; 26S protease regulatory subunit 8 [KO:K03066]
105824126  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
105824380  PSMB8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
105824382  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
105824812  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
105825671  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 isoform X1 [KO:K06693]
105825847  PSMC6; 26S protease regulatory subunit 10B [KO:K03064]
105825876  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
105827535  PSMF1; proteasome inhibitor PI31 subunit [KO:K06700]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
pcoq04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

DBGET integrated database retrieval system