KEGG   PATHWAY: phi03022
Entry
phi03022                    Pathway                                
Name
Basal transcription factors - Pseudopodoces humilis (Tibetan ground-tit)
Class
Genetic Information Processing; Transcription
Pathway map
phi03022  Basal transcription factors
phi03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Pseudopodoces humilis (Tibetan ground-tit) [GN:phi]
Gene
102099170  TAF8; transcription initiation factor TFIID subunit 8 [KO:K14649]
102099247  GTF2H4; general transcription factor IIH subunit 4 [KO:K03144]
102099888  TAF9B; transcription initiation factor TFIID subunit 9B [KO:K14535]
102100097  CCNH; cyclin-H [KO:K06634]
102101323  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
102101509  TBPL1; TATA box-binding protein-like protein 1 [KO:K03120]
102101836  TAF4; transcription initiation factor TFIID subunit 4 [KO:K03129]
102102769  TAF12; transcription initiation factor TFIID subunit 12 [KO:K03126]
102102881  TAF3; transcription initiation factor TFIID subunit 3 [KO:K14650]
102103307  GTF2A1L; TFIIA-alpha and beta-like factor [KO:K03122]
102103904  TBP; TATA-box-binding protein [KO:K03120]
102104045  GTF2I; general transcription factor II-I isoform X1 [KO:K03121]
102104580  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
102104874  TAF5; transcription initiation factor TFIID subunit 5 [KO:K03130]
102105020  TAF10; transcription initiation factor TFIID subunit 10 [KO:K03134]
102106343  TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
102106458  [KO:K03142]
102107045  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
102107170  GTF2H1; general transcription factor IIH subunit 1 isoform X2 [KO:K03141]
102107212  TAF4B; transcription initiation factor TFIID subunit 4B [KO:K03129]
102107673  TAF15; TATA-binding protein-associated factor 2N [KO:K14651]
102107720  GTF2H3; general transcription factor IIH subunit 3 [KO:K03143]
102107979  [KO:K03129]
102108098  TBPL2; TATA box-binding protein-like protein 2 [KO:K03120]
102108568  GTF2B; transcription initiation factor IIB isoform X2 [KO:K03124]
102108973  [KO:K03136]
102109098  GTF2F2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
102109557  GTF2E2; transcription initiation factor IIE subunit beta [KO:K03137]
102109812  [KO:K03131]
102110984  TAF7L; transcription initiation factor TFIID subunit 7-like [KO:K03132]
102111752  GTF2A1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
102112381  TAF11; transcription initiation factor TFIID subunit 11 [KO:K03135]
102112427  TAF13; transcription initiation factor TFIID subunit 13 [KO:K03127]
102112649  GTF2F1; general transcription factor IIF subunit 1 [KO:K03138]
102112725  ERCC3; TFIIH basal transcription factor complex helicase XPB subunit [KO:K10843] [EC:5.6.2.4]
102112851  GTF2H5; general transcription factor IIH subunit 5 [KO:K10845]
102113265  TAF1; transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
102114094  TAF2; transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
102114195  CDK7; cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
102114590  MNAT1; CDK-activating kinase assembly factor MAT1 [KO:K10842]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
phi03020  RNA polymerase
phi03420  Nucleotide excision repair
KO pathway
ko03022   

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